ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_308111_46

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 50619..51953

Top 3 Functional Annotations

Value Algorithm Source
PA14 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNF1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 450.0
  • Bit_score: 447
  • Evalue 1.30e-122
PA14 domain protein {ECO:0000313|EMBL:EEF58610.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 450.0
  • Bit_score: 447
  • Evalue 1.90e-122
cbp32B; carbohydrate binding protein similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 347.0
  • Bit_score: 259
  • Evalue 1.10e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1335
ATGCTGCTGGCGGCGCTGGCCCTGGCTTTGGTTCCGCTGGCATCACCCGCAGCCGTTGACGATTCAAACCGGCTTGGATTGGCGGCGCGTTCCGCAGCCACGCCTTATCTGCACATGCCGAAACACGCCGGCGGCGCGCTGCCCCGGCGGCTTTCCCAAACGGGCGCGTTCAAGGATACGCCTCGCATGACGCCGGCCGACGGCCTGATTCCGTATGATGTCGTCGTTCCCTTTTGGTCGGACGGCGCGGAAAAGAAGCGCTGGGTTTCCGTGCCGCCGGACGCGAGGATCACGTTCTCCCCGACCGGCGAATGGACGTTCCCGCCGGGAACCGTTTTCGTGAAGACCTTCCTGCGCGCCACGAACGACGCGGATACGAATTCCCTGCGCCGGCTGGAAACGCGGCTGCTCGTTTGCGACGCGGACGGCGGCGTTTACGGCGCGGTTTACCAATGGCGGGCGGACAACCGCGACGCGGATTTGCTGGCGACGAACCGGACGGAAACCTTTTCGATCCAAACGGCGGCGGGCCGCCGCACGCAGGATTGGTATTATCCGAGCCGGAAGGATTGTCTCACGTGCCACACAGCCAACGCCGGTCATGTGCTTGGTGTCAAAACCCGGCAGTTGAACCGCGACTTCACCTATCCTTCCGGCGTTCGCGAAAATGAATTGCGCGCGTGGAGCCGCCTCGGCTTGTTCGACACGAATCTGGACCAGACGGACTTGAAGGCACTGCCGGCGCTCGCCCGGCTCGACGACACGACGCACAGTCTGGAGGACCGCGTGCGGTCCTATCTGGATGCGAACTGCGCCAACTGTCATCGTCCCCACGGCACGGTGGCCTACTTCGACGCGCGCTACGACACGCCGCTCGCGAAGCAAAACCTCGTTGATGGCCCGGTATTGTTTGACGAACGCATTGATGGCGCGCGGGTCATCGCGCCGCACGACATCTGGCGTTCGATTCTCTACATGCGGACCGACACAACAGAAGCGTTCAAGATGCCGCCGCTGGCGCGTGAGACAATAGATGAAAACGGCATGGAACTGTTACGGCAATGGATCAACAGCCTGCCCGGCCGGCCAGTCCTCGCTCCGCCGCAAATTTCACCCGCCGGCGGTAATTTCACCCACGCGGTGGACGTGGTTTTGAAAAGTGATCCGGGAGCGGCCATTCGTTACACCTTGGATGGCACCGTCCCGACGACGGCGGATTTGCTTTACGAGAAACCCATTCGCTTGAGCAGCCCCACCATCCTGCGGGCGAAAGCGTTCAAACCCGGATGCACTCAAAGCATCACCGCGCAGGAAATTTTCCTGGTCGGCCAATGA
PROTEIN sequence
Length: 445
MLLAALALALVPLASPAAVDDSNRLGLAARSAATPYLHMPKHAGGALPRRLSQTGAFKDTPRMTPADGLIPYDVVVPFWSDGAEKKRWVSVPPDARITFSPTGEWTFPPGTVFVKTFLRATNDADTNSLRRLETRLLVCDADGGVYGAVYQWRADNRDADLLATNRTETFSIQTAAGRRTQDWYYPSRKDCLTCHTANAGHVLGVKTRQLNRDFTYPSGVRENELRAWSRLGLFDTNLDQTDLKALPALARLDDTTHSLEDRVRSYLDANCANCHRPHGTVAYFDARYDTPLAKQNLVDGPVLFDERIDGARVIAPHDIWRSILYMRTDTTEAFKMPPLARETIDENGMELLRQWINSLPGRPVLAPPQISPAGGNFTHAVDVVLKSDPGAAIRYTLDGTVPTTADLLYEKPIRLSSPTILRAKAFKPGCTQSITAQEIFLVGQ*