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berkeley_reactor_200306_planktonic_scaffold_295472_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(1942..3228)

Top 3 Functional Annotations

Value Algorithm Source
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 429.0
  • Bit_score: 666
  • Evalue 2.50e-188
phosphoribosylamine/glycine ligase (EC:4.1.1.21 6.3.4.13) similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 429.0
  • Bit_score: 452
  • Evalue 1.10e-124
Phosphoribosylamine--glycine ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPG5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 429.0
  • Bit_score: 666
  • Evalue 1.80e-188

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1287
ATGAAAATCCTCGTCATTGGTTCAGGCGGACGCGAACACGCCCTGGTTTGGAAACTGGCACAATCGCCGCATGTCACGCAAATGTGGTGCGCGCCGGGCAACGCCGGCATTGCGCAGGAACGTCTGGCGAAAAACAGCGCGTCGGTGCAGAACGTCGCCATTGGGGCTGAGGATTTGCCGAAGCTATTGGATTTCGCCAAGGAAAACCGGGTGGATCTCACAGTGGTCGGACCGGACAATCCGCTGGCGCTGGGCATTGTGGATTTGTTTCAGGAAAATGGTTTGCGCATCTGGGGCGTGAACCAGCAGGCCGCGCAGTTTGAATCATCCAAGGTTTTCTCCCAGAAATTCATGGAGAAATATGGCATTCCGACCGCCGCCGCCGGAACGTTTGACGAGGTCGTCGCCGCCAAAAAATTCGCCGCCGGTCTCGGCAAATGCGTCGTGAAAGCCGACGGTCTCGCGCTGGGCAAAGGCGTTTTGATCTGCGCGAATGCCGCCGAAGCCGAAACAGCCGTGGACGAAATCATGGTGGCCAAAGCCTTCGGCGCGGCCGGCACGCGCGTCGTGATTCAAGAATTTCTCGAAGGCATCGAAGTTTCGCTGCACGCGTTGTGCGATGGCAAAACCGCCAAAATTTTCCCCACCTCACAAGATCACAAACGCGCGCTCGACGGCGATCAAGGTTTGAACACCGGCGGTATGGGCACGTATTCGCCCACCCCGTTTCTTAACGATGCGCAACTCAACGAAGTTTCGCGCAAGGTGCTGGAACCGTTCATGCATGGCTGCGTGGCGGAAGGCATTGATTTTCGCGGTTTGCTGTATCCCGGCATCATGCTCACCAAAGAAGGTCCGAAGATTTTGGAATTCAACGCTCGCTTCGGCGATCCCGAAACGCAGGTTTATCTCACGCGTTTGGAAAACGATTTGGTGGAATTGCTCGATGCCAGCGTCAACGGCACCTTGGCCCAGCACGAATTGAAGTGGAAACCCGCAGCCAGCGTCTGTGTCATCATGGCCAGCGGCGGTTATCCGGGAAACTATCCCAAGGGCAAAATCATCACCGGATTGGATGTGGCGAATGCGTTACCGAACACCAAAGTGTTCCACGCCGGCACCGCGATGAAAGAGGGCCAGATTGTGACCAGTGGCGGCCGGGTTCTCGGTGTGACCGCGTTCGGCAAGGATTTGAAAGCCGCGCAAGCCGCCGCCTACGCTGCAGTGGAGTGCATCCAATTTGAAGGCGCGCATTTCCGTCACGACATCGCCGCGAAGGCGTTTTGA
PROTEIN sequence
Length: 429
MKILVIGSGGREHALVWKLAQSPHVTQMWCAPGNAGIAQERLAKNSASVQNVAIGAEDLPKLLDFAKENRVDLTVVGPDNPLALGIVDLFQENGLRIWGVNQQAAQFESSKVFSQKFMEKYGIPTAAAGTFDEVVAAKKFAAGLGKCVVKADGLALGKGVLICANAAEAETAVDEIMVAKAFGAAGTRVVIQEFLEGIEVSLHALCDGKTAKIFPTSQDHKRALDGDQGLNTGGMGTYSPTPFLNDAQLNEVSRKVLEPFMHGCVAEGIDFRGLLYPGIMLTKEGPKILEFNARFGDPETQVYLTRLENDLVELLDASVNGTLAQHELKWKPAASVCVIMASGGYPGNYPKGKIITGLDVANALPNTKVFHAGTAMKEGQIVTSGGRVLGVTAFGKDLKAAQAAAYAAVECIQFEGAHFRHDIAAKAF*