ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_295472_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 54427..56619

Top 3 Functional Annotations

Value Algorithm Source
Surface antigen (D15) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZV96_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 722.0
  • Bit_score: 474
  • Evalue 9.80e-131
surface antigen (D15) similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 722.0
  • Bit_score: 474
  • Evalue 2.80e-131
Surface antigen (D15) {ECO:0000313|EMBL:ACB76767.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 722.0
  • Bit_score: 474
  • Evalue 1.40e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2193
ATGGAGGATCATTTCGCGATGACACCCGCCGGCATTTTGGCGTTCCAACGGCCACGAACGCGCTGGCGGCGGGCGCGCGGGTGGTTGCTGGCGGGCGTGATGCTGCCTCTGCTGACGCTGATCGTTTGCGCCGCGGGAACCGGCGGAACCAACCAGCCGGCGGCGGTGAAAATTTCCGGCTTCGGCCTTTTGGGCAACCGCGATTTGCTGAATTTATTGAAGCATTTTCAGTCCGACGGCCGGCTGCCGCCGGTGCTCTCCGCCGCGTTTGTGGAGGATGCGGCGCTGGTGCTGTTTTCACAGGCGGGAAGCCAGGGTTATCTGGACGCGAGCCTGGAAGCGGAGTTCACGTTGAGCGACGGCCGGCATTTGGCCATGCTCTGGACGAATGCGCTGCAGGCGCAACTGCCCGGCGATTTCGCGGCCAGGGCCGCCCGTTTCAAGCTGCGGGGCGGCGTGCGATTTTATTACGCCGGCATCGAGTTTGATGGATTGCACGCGCTGTCGCCAACCGAAGCGCGAAGTTACTTCGTGGGCGGCGACACGCTGCTCCGCTTGCGGTCGGACCGCATTTTCAGTCCCGACCGGCTGGAAAATTCGCTGGCCGCGCTGCGCCAGGCATTGATGCGCAGCGGTTACCGCGACGCCACGGTCACGACCAACGAGGTCAGGCTCGATCCAAGCTCCGGCGCGGTGAACGTCAAGCTCGACATCAACGAAGGCCTGCCCACGTATGTTCGTTCGGTGGCGGTAACGGTGAATGCGCCCGGCACGGCTTCCGGCACGAACGGCGCCCCGCCGCAGGAAACCTTGCATCCGGACAAGCCGTATTCATTGCTGCTGCGCGAGGACATCGCCCAAAGTTTGCAGGAGGCGGAATTCAAGCTGGGTTACCCCGACACCACGGTTTCGTTCCAAGACCTCCGGCGCGAAACCAACGCCGCGCGCATTGACCTGGACCTGGCCGCCGAAGTGGAGACCGGACCGCGCGTGCAGGTTGGCAAACTGGAATTTTCCGGCCATCATCTCACCCGCGATTCCGTCATCAAAAGCCGCATCTCGCTGGCGCCGGGCGACTGGCTGAATCCGCTGGCGGCCGAAGCCTCCCGCCAGCGCCTGGCCCGGCTGGGCGTTTTCGATTCGGTGCAACTGCGTTACACCGGCACCAATTCGACGACGCGGAACGTGGTGTATGATTTCAAGGAAACCAAGCCGGTTTCGCTCAGTGTGCTGGCCGGCTACGGCAGCTACGACATGCTGCGGGGCGGATTGGAATTTGAAAACCGCAACGTGCTGGGACTGGCCCACGATCTTCGGATCCGCGGCGTGCAGTCGTTTAAATCCTCCAGCGGCGACGGCCAATACACCGTGCCGGAGGTGCTCGGCGCGGACATGAACGCCTTCGTGAAGGCGTTTGGATTGCGCCGCGAGGAAATTTCGTTTCTGCGCAATGAATATGGCGGTTCCGTTGGCATTCAAAAATATCTGGCGCCGGTCAAAACCGACCTGAGCGTTCACTACGATTACGAATGGCTGAAAACTTCCGACCTGACGACCACCAACGCCGGCGATGTGGGCGTGACGAATGCGCGGTCCGCCGCCATCGTGATTGACCTGAATCATGACCGGCGCGTGACGCCGCTGCTGCCCCGGCACGGACTCAAACTGTTCGGGACGATGGAGCTGGCGGCCGGCGCGCTCGGCGGCAATGTGAATTACCAGCGTTTCCTGATCGGAGGTTCCTATCACGCGGATTTGGTCAATGGCTTGCTGCTGCATCTGGGGTTGACCCAGGGCATGACCTTCACCTGGGGCGGCTCGCCGGATCAATTGCCGTTCAACAAACGTTATTTCCCCGGCGGTGAAAACTCCATCCGCGGCTACCAGGAAGGCCAGGCGTCGCCGTTGGATGCCAATGGCAATCAGTTGGGTGCGGAAACTTACACGCTGGGCAACGTCGAATTGGAACAGCTCCTCACGAAGTCATGGTCCATCGTGGCGTTTTTTGACGCCTTGGGCGAGGCGCAATCCCGCAATGATTATCCCTGGGATCAAAGGCTGTATTCCGCGGGCGGCGGACTTTGCTGGCGCACGCCCATCGGCCCGGTGCGGCTGGAATACGGCTACAACCTGAACCCGCGCCCGCATGACCCCATGGGCACTTTGCATTTTTCCGTCGGCTTCCCGTTTTGA
PROTEIN sequence
Length: 731
MEDHFAMTPAGILAFQRPRTRWRRARGWLLAGVMLPLLTLIVCAAGTGGTNQPAAVKISGFGLLGNRDLLNLLKHFQSDGRLPPVLSAAFVEDAALVLFSQAGSQGYLDASLEAEFTLSDGRHLAMLWTNALQAQLPGDFAARAARFKLRGGVRFYYAGIEFDGLHALSPTEARSYFVGGDTLLRLRSDRIFSPDRLENSLAALRQALMRSGYRDATVTTNEVRLDPSSGAVNVKLDINEGLPTYVRSVAVTVNAPGTASGTNGAPPQETLHPDKPYSLLLREDIAQSLQEAEFKLGYPDTTVSFQDLRRETNAARIDLDLAAEVETGPRVQVGKLEFSGHHLTRDSVIKSRISLAPGDWLNPLAAEASRQRLARLGVFDSVQLRYTGTNSTTRNVVYDFKETKPVSLSVLAGYGSYDMLRGGLEFENRNVLGLAHDLRIRGVQSFKSSSGDGQYTVPEVLGADMNAFVKAFGLRREEISFLRNEYGGSVGIQKYLAPVKTDLSVHYDYEWLKTSDLTTTNAGDVGVTNARSAAIVIDLNHDRRVTPLLPRHGLKLFGTMELAAGALGGNVNYQRFLIGGSYHADLVNGLLLHLGLTQGMTFTWGGSPDQLPFNKRYFPGGENSIRGYQEGQASPLDANGNQLGAETYTLGNVELEQLLTKSWSIVAFFDALGEAQSRNDYPWDQRLYSAGGGLCWRTPIGPVRLEYGYNLNPRPHDPMGTLHFSVGFPF*