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berkeley_reactor_200306_planktonic_scaffold_295472_58

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 66855..68246

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00037F33C6 similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 464.0
  • Bit_score: 578
  • Evalue 3.10e-162
Putative two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF60934.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 267.0
  • Bit_score: 414
  • Evalue 1.40e-112
acetoacetate metabolism regulatory protein AtoC similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 475.0
  • Bit_score: 391
  • Evalue 2.60e-106

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1392
ATGAGCGCGCCCCTGCCACCGGTGCTCGTCGTGGATGACGAGAAAAACATGCGCCGCTCGCTGCAGACCATGCTCGGCGACGAAGGTTACGCCGTGCGGGTCGCGGAGTCCGCCGAGGAGGCGCTCGGCCTGCTGGCGCAGGGGGAATTTTTCATGGTGATCACCGATGCCCGGCTGGGCGGCATGACGGGCTATGAATTTCTCGCCCGGATCCGGCACCAGTGGCCCGATTTGCCAACGCTGATGATCACCGCCTTCGCCACGCCCAAGCTCGCCGTGGAAGCCATCAAATCGGGCGCGATGGATTATCTCTCCAAGCCGTTCGAGCCGGAGGAACTGTTTCATTCCGTCGCCCGCTGCGCCGAACGCTTCCGGTTGCTGCGCGAAAATGCCGCCCTGCGGTCGCGCGCCGGTGAAACCTACACGCTGGATCAAATCGTTGGCGAATCGCCGAAGATTCGCGACCTGCGCCAGCTCGTTCGCACCGTGGCGGCGACCGACGCGCGGGTCTTGATTCTGGGCGAAAGCGGCACGGGCAAGGAACTGGTGGCCGGGGCGCTGCATAGTTTGAGCAGCCGGCGCAATGAAAATTATGTCCGCATCAACTGCGCGGCCATTCCCGAAACGCTGCTGGAAAGCGAGTTGTTCGGCCATGAAAAAGGCGCCTTCACCGGCGCCTTGAAACAAAAACCGGGCCGGGTGGAGGAGGCGGACGGCGGCACGATTTTTCTCGATGAAATCGCCGACATGGGACGGCCCCTGCAGGCGAAACTGCTGCGGTTTCTGGAGGACGGCTCATTCACCCGCGTCGGCGGCACGGAGGAATTGCGGGTGAATGTGCGGCTGGTGGCCGCCACCAACCGGGACATCGTGCAGGCCATTGGCGCGGGCGAATTTCGCGAGGACCTGTTCCACCGGCTCAACGTCGTCCAGTTCAACCTGCCGCCCCTGCGCGAACGCGGCGAAGACATCCGACTCCTCGCGGAACATTTCCTGAAAATCTTCCGGGCGACGTTGAACAAAAACATCCATGGTTTTGCCCCCGCCGCGTTGCAACGGCTCCTGACACACCACTGGCCCGGCAATGTCCGCGAATTGCGCAATGTGGTGGAACGCGCCCTGATTCTGGAAAGCGGCCGGGAAATTCAGCCGGCCAGCCTGCCGGATTTCGCCAGCGAACAGCGCCTGCAAAAAGGCCAGGCGCCGGCCGCGCCGGATGAATCGCTGGAAGCCGCCCTCGAGCGGGTCGAACGCGAACTGATCCAGGACGCCCTGGAACGCAGCAATTTCAACCTGACACGCGCCGCCGGCCAGCTTAAACTCACCCGGCATTCCTTGCGCTATCGGATGCAACGCTTGAACATGACTGCGGCGGGAGAATTAGACGCATGA
PROTEIN sequence
Length: 464
MSAPLPPVLVVDDEKNMRRSLQTMLGDEGYAVRVAESAEEALGLLAQGEFFMVITDARLGGMTGYEFLARIRHQWPDLPTLMITAFATPKLAVEAIKSGAMDYLSKPFEPEELFHSVARCAERFRLLRENAALRSRAGETYTLDQIVGESPKIRDLRQLVRTVAATDARVLILGESGTGKELVAGALHSLSSRRNENYVRINCAAIPETLLESELFGHEKGAFTGALKQKPGRVEEADGGTIFLDEIADMGRPLQAKLLRFLEDGSFTRVGGTEELRVNVRLVAATNRDIVQAIGAGEFREDLFHRLNVVQFNLPPLRERGEDIRLLAEHFLKIFRATLNKNIHGFAPAALQRLLTHHWPGNVRELRNVVERALILESGREIQPASLPDFASEQRLQKGQAPAAPDESLEAALERVERELIQDALERSNFNLTRAAGQLKLTRHSLRYRMQRLNMTAAGELDA*