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berkeley_reactor_200306_planktonic_scaffold_295472_150

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 175147..175614

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator, MarR family protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746629 similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 139.0
  • Bit_score: 152
  • Evalue 1.80e-34
Uncharacterized protein {ECO:0000313|EMBL:KCZ56689.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 149.0
  • Bit_score: 131
  • Evalue 6.10e-28
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 131.0
  • Bit_score: 107
  • Evalue 2.50e-21

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Taxonomy

Hyphomonas chukchiensis → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGAGCTCCCAAACGTCCTCGTTCCCCGATCAGGCGGTCACCCTCGGTGCCCTGTTGCGGCGGCCGTATCGTAAGCTGTCGGACCGGCTGTATGCGGAAATGGCCGCCAACGGTTTTCCCGAAATCCGGCCGTCGCACAGCGTGGTGTTCCGCCACATTGCCCCGGCAGGTTCCCGCCTCACGGAACTGGCCGGCACCGCCGGCCTGACCAAGCAAAGCATGGCCTACCTGGTCGGCCATCTGGAACAGCATGGTTATGTCAAGATCACGACGGATCCCGCCGATGGACGGGCCCGGCGGGTGCAATTGACCCGGCGCGGTAACGCCTTCGTGGCTACGCTGCTCAAAGCCAGTCTTCGGCTGGAGAATGAGGCCGGAAAAATAATGGGGAGCGCCAAACTCCAGAACCTGCGCGCGGGCCTCGAAGCGCTGGACGCGGCCATTTCGGAATTATCCGGCGGACGGTGA
PROTEIN sequence
Length: 156
MSSQTSSFPDQAVTLGALLRRPYRKLSDRLYAEMAANGFPEIRPSHSVVFRHIAPAGSRLTELAGTAGLTKQSMAYLVGHLEQHGYVKITTDPADGRARRVQLTRRGNAFVATLLKASLRLENEAGKIMGSAKLQNLRAGLEALDAAISELSGGR*