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berkeley_reactor_200306_planktonic_scaffold_310271_20

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 29947..31425

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSZ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 376.0
  • Bit_score: 352
  • Evalue 6.50e-94
Integrase family protein {ECO:0000313|EMBL:EEF57028.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 376.0
  • Bit_score: 352
  • Evalue 9.10e-94
integrase similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 318.0
  • Bit_score: 190
  • Evalue 9.20e-46

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1479
ATGAAAACTGATAAAAAGACTGAAAGCCTTTGGCAAAAGACGCGACACGCCAACTTGGTTCGCAATTCTTCATCGGGCAAATACTTTGCCCGGTTCAGGCATAACGGCAAGCTCATTTGGAGAAGCTTGGACACTGCTGTATTGAGCGTCGCGGCACAACGTTTGCCAGACAAGATTAAGGCAGCCAAAGACGAACAGGATTTGCTTGCGTCAGGAAGTGATCCAAGAATTACTTTTGAGGGCGCAGCCATGCTTTATCAAAAGCGAGTTCAAGCGTCGCCGGATTTTAAGGCGAGAACAAAAGCATATCACGATGAGCGTTTGATTGCACTGTTCAAGTCATGGCCAGAAATAAAGAATAGGCCCATTAAGGACATAACCAAAATGGAGTGCATTGAATGGCGGAGTCGTTTCGCAGAACAATTCAGCCCATCAGTTTTCAATCACACGTTGGGACTTCTCCGCGCCATCTTTGAAATCGGAATTGAAGCGGGTGCACGGCGCGATAATCCGGCCAAAGCAAAGGAAATGAAACGGCTTCGGGAAACTTCAAAACGCCTGCGCTTGCCAGAGCCGAAGCAGTTTGAAAAGTTTGTTAAGGAGATTGAAAATAGTGGCAGCGGATTTTCAAAACCATGTGCGGAATTGGTTCAATTTTTAGCCTTTGGTGGTTTCCGTATCGGGGAAGCCAAGCACATCACGTGGGCCGATTGCGACTTTGGGCGGGGGAAAATAATTGTCAGTGGCGACCCTGAACAAGGGTTGAAGGGGCGTCATGCAGGTGAAACCCGCGAAGTGCCGATGATCCCCGACATGCGGCGGTTGCTTGAACAAATGCTGGCAGAGCGGCCAGAAGAAAAATCATCAACAACAGTCATGCGTGTATATGAATGCCAAAAATCAATGGATCGCGCCGCCAAAAAGATCGGGATGTATCGGATTACGCATCATGATTTGCGTCACTTGTTTGCCACGCGTTGTATTGAAACCGGGGTGGACCTCCCGACAGTTTCGCGGTGGCTCGGCCACAAGGACGGCGGTGCGCTTGCGATGAAAGTTTATGGTCATTTGCGCGACCAACACTCAACAAGTATGGCGCAAAAGGTAGTATTCGTAAATGAATCGGCGGCGAACACAGTCGTCACAGTCGTAGAAAAAGTATCGAACGATAAGCCAGTAAATGCCGGCCCACAAAGCAAAACTGCCGCCCATGCAAAGGCCACTTACTCGTATCCCTGGTGGGCGTCGAATGATGCGATTGAAGTGTTTTGGGGACAGGCTAATGAACCGGTGCAAATCGTGCCGATGGGAAAATATTTGCAAAGCGCGAAAACCGCAATGAAGCGCGAAGTATTTGAACAAGAACTAACCGAGCCGCAAGTCTTGTTGGAAGAATTTGCTGCGCGTGTGGGCGCAGAAATGATTGAAAAATTAAAGGCTAAGATTTCTCCGCCAGCGGCTGAAACACTGGCAGCTTAA
PROTEIN sequence
Length: 493
MKTDKKTESLWQKTRHANLVRNSSSGKYFARFRHNGKLIWRSLDTAVLSVAAQRLPDKIKAAKDEQDLLASGSDPRITFEGAAMLYQKRVQASPDFKARTKAYHDERLIALFKSWPEIKNRPIKDITKMECIEWRSRFAEQFSPSVFNHTLGLLRAIFEIGIEAGARRDNPAKAKEMKRLRETSKRLRLPEPKQFEKFVKEIENSGSGFSKPCAELVQFLAFGGFRIGEAKHITWADCDFGRGKIIVSGDPEQGLKGRHAGETREVPMIPDMRRLLEQMLAERPEEKSSTTVMRVYECQKSMDRAAKKIGMYRITHHDLRHLFATRCIETGVDLPTVSRWLGHKDGGALAMKVYGHLRDQHSTSMAQKVVFVNESAANTVVTVVEKVSNDKPVNAGPQSKTAAHAKATYSYPWWASNDAIEVFWGQANEPVQIVPMGKYLQSAKTAMKREVFEQELTEPQVLLEEFAARVGAEMIEKLKAKISPPAAETLAA*