name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_310271_1
unknown
|
Not on your lists |
comp(3..83)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310271_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
319..2166
|
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEN8_9BACT
DNA topoisomerase type IIA subunit B region 2 domain protein {ECO:0000313|EMBL:EEF61752.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
parE; DNA topoisomerase 4 subunit B
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_3
unknown
|
Not on your lists |
comp(2127..2216)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310271_4
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria
|
Not on your lists |
comp(2213..4327)
|
Tax=RifOxyB12_full_OP3_50_7_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_5
unknown
|
Not on your lists |
4807..5028
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310271_6 |
Not on your lists |
5025..5426
|
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034B3056
Marine sediment metagenome DNA, contig: S01H1_S38526 {ECO:0000313|EMBL:GAG50444.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sll1715; hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5508..6860)
|
cysteine desulfurase NifS (EC:2.8.1.7)
Aromatic amino acid beta-eliminating lyase/threonine aldolase id=4501210 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Tax=GWA2_Deltaproteobacteria_65_63_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_8
RLO_PLX_64_10, Bacteria
|
Not on your lists |
comp(6893..8389)
|
carboxypeptidase Taq (EC:3.4.17.19)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003795227
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_9
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria
|
Not on your lists |
8590..11517
|
Regulator of chromosome condensation RCC1 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IIH9_9CHLR
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:EFO79054.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
11528..14914
|
Immunoglobulin I-set domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJD9_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF60000.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_11
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria
|
Not on your lists |
14883..15242
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC45_9BACT
hypothetical protein
Tax=RBG_16_Zixibacteria_53_22_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_12
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
15507..18131
|
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEH9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDY80821.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(18479..18895)
|
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Putative Holliday junction resolvase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDA0_9BACT
rnhD; RNase H-like ribonuclease
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_14
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria
|
Not on your lists |
comp(19202..19660)
|
DoxX subfamily, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK91_9BACT
DoxX protein
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_15
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria
|
Not on your lists |
comp(19754..20326)
|
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002F44FDD
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KIY10950.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
NADPH-dependent FMN reductase
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(20373..20828)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM79_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59072.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(20939..21706)
|
Pirin domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D611_9BACT
Pirin domain protein {ECO:0000313|EMBL:EDY18214.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Pirin-like protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_18 |
Not on your lists |
21916..23097
|
Marine sediment metagenome DNA, contig: S01H1_C00261 {ECO:0000313|EMBL:GAF74553.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transposase for insertion sequence element IS406 id=2214469 bin=GWB2_Chloroflexi_54_36 species=Burkholderia multivorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
IS406 transposase
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_19
unknown
|
Not on your lists |
23505..24050
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310271_trna_2
unknown
|
Not on your lists |
comp(27036..27109)
|
transferRNA Ile
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_trna_1
unknown
|
Not on your lists |
comp(27121..27193)
|
transferRNA Ala
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_16S_1
unknown
|
Not on your lists |
comp(27383..28914)
|
16S ribosomal RNA (16S rRNA)
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
29947..31425
|
Integrase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSZ3_9BACT
Integrase family protein {ECO:0000313|EMBL:EEF57028.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
integrase
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_21
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(31742..32947)
|
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYY6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF89874.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_22
unknown
|
Not on your lists |
comp(32961..33566)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310271_23
unknown
|
Not on your lists |
comp(33573..33797)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310271_24
unknown
|
Not on your lists |
comp(33886..34077)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_310271_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
34339..35256
|
LysR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745DD5
Transcriptional regulator {ECO:0000313|EMBL:CDM66657.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
LysR family transcriptional regulator
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(35831..36205)
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21033.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_310271_27
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria
|
Not on your lists |
comp(36237..37091)
|
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WU00_GEOS8
hypothetical protein
Tax=GWB2_Clostridiales_37_7_curated
|