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berkeley_reactor_200306_planktonic_scaffold_310271

Search features with annotation key words

Displaying items 31-60 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_310271_28
unknown

Not on your lists

comp(37098..37379)
DNA (282bp) protein (94aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_29
unknown

Not on your lists

37769..38242
DNA (474bp) protein (158aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_30
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(38899..39561)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IMS5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94692.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_31
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(39558..40691)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IMS4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF92719.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_32
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(40688..41626)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IMS3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94691.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_33
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(41595..42278)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IMS2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF92718.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_34
unknown

Not on your lists

42404..42550
DNA (147bp) protein (49aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_35
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(42505..43314)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYY8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF89875.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_36
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(43381..43788)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IMR8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94687.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_37
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(43785..46520)
DNA (2736bp) protein (912aa)
Putative uncharacterized protein id=4668346 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
berkeley_reactor_200306_planktonic_scaffold_310271_38
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(46513..46854)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IMR6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94686.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_39
unknown

Not on your lists

comp(46851..47147)
DNA (297bp) protein (99aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_40
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

47233..48159
DNA (927bp) protein (309aa)
ATPase AAA-2 domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYY1_9BACT
ATPase
ATPase {ECO:0000313|EMBL:AHF89869.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_310271_41
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(48249..48998)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XC59_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62527.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_310271_42
unknown

Not on your lists

comp(48995..49522)
DNA (528bp) protein (176aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_43
unknown

Not on your lists

comp(49510..50412)
DNA (903bp) protein (301aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_44
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(50451..51467)
DNA (1017bp) protein (339aa)
id=2867023 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
HEAT repeat-containing protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
berkeley_reactor_200306_planktonic_scaffold_310271_45
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(51510..54623)
DNA (3114bp) protein (1038aa)
PA14 domain protein id=2867024 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
beta-glucosidase
Tax=GWF2_Lentisphaerae_50_93_curated
berkeley_reactor_200306_planktonic_scaffold_310271_46
unknown

Not on your lists

comp(54953..55243)
DNA (291bp) protein (97aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_47
unknown

Not on your lists

comp(55240..55824)
DNA (585bp) protein (195aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_48
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

56526..56993
DNA (468bp) protein (156aa)
MerR, DNA binding family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRP9_9SYNE
MerR, DNA binding family {ECO:0000313|EMBL:EDX83811.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
MerR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_310271_49
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

57051..57695
DNA (645bp) protein (215aa)
Heavy metal transport/detoxification protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPI6_OPITP
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ACB74505.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_310271_50
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

57692..58060
DNA (369bp) protein (123aa)
Copper-transporting P-type ATPase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVI4_METPS
copper-transporting P-type ATPase
Copper-transporting P-type ATPase {ECO:0000313|EMBL:BAI60456.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
berkeley_reactor_200306_planktonic_scaffold_310271_51
unknown

Not on your lists

58209..58301
DNA (93bp) protein (31aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_52
Simkania negevensis, Simkania, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

58313..59791
DNA (1479bp) protein (493aa)
merA; mercuric reductase (EC:1.16.1.1)
Mercuric reductase {ECO:0000313|EMBL:CCB87802.1}; EC=1.16.1.1 {ECO:0000313|EMBL:CCB87802.1};; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
Mercuric reductase n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L2V6_SIMNZ
berkeley_reactor_200306_planktonic_scaffold_310271_53
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60090..61313
DNA (1224bp) protein (408aa)
Integrase/recombinase n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DU99_THIND
integrase/recombinase
Integrase/recombinase {ECO:0000313|EMBL:AGA32603.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
berkeley_reactor_200306_planktonic_scaffold_310271_54
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61310..62287
DNA (978bp) protein (326aa)
Integrase family protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CID7_9BURK
Integrase family protein {ECO:0000313|EMBL:EIM95655.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
integrase family protein
berkeley_reactor_200306_planktonic_scaffold_310271_55
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62284..63315
DNA (1032bp) protein (344aa)
Integrase/recombinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q989Z0_RHILO
integrase/recombinase
Integrase/recombinase {ECO:0000313|EMBL:BAB52554.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
berkeley_reactor_200306_planktonic_scaffold_310271_56
unknown

Not on your lists

64167..64445
DNA (279bp) protein (93aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_57
unknown

Not on your lists

64540..64845
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 31-60 of 105 in total

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