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berkeley_reactor_200306_planktonic_scaffold_310271

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Displaying items 91-105 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_310271_88
unknown

Not on your lists

comp(106156..106722)
DNA (567bp) protein (189aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_310271_89
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(106727..109090)
DNA (2364bp) protein (788aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EEF60699.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EEF60699.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Carboxyl-terminal protease n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH64_9BACT
prc; Periplasmic protease
berkeley_reactor_200306_planktonic_scaffold_310271_90
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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109224..110060
DNA (837bp) protein (279aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH65_9BACT
peptidylprolyl isomerase, FKBP-type
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
berkeley_reactor_200306_planktonic_scaffold_310271_91
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

110419..111936
DNA (1518bp) protein (506aa)
Protease Do {ECO:0000313|EMBL:EEF62733.1}; EC=1.3.1.74 {ECO:0000313|EMBL:EEF62733.1};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
protease Do (EC:3.4.21.107)
Protease Do n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB48_9BACT
berkeley_reactor_200306_planktonic_scaffold_310271_92
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

112008..112925
DNA (918bp) protein (306aa)
Chaperone protein DnaJ n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFY3_9BACT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
molecular chaperone DnaJ
berkeley_reactor_200306_planktonic_scaffold_310271_93
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(113006..113653)
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY58_OPITP
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACB76207.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_310271_94
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(113702..115780)
DNA (2079bp) protein (693aa)
Histidine kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY62_OPITP
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACB76208.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_310271_95
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

115975..116757
DNA (783bp) protein (261aa)
Type II secretory pathway pseudopilin PulG-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSD6_9BACT
Type II secretory pathway pseudopilin PulG-like protein {ECO:0000313|EMBL:EEF57236.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_310271_96
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116889..122645
DNA (5757bp) protein (1919aa)
Polymorphic membrane protein, Chlamydia:Haemagluttinin:Filamentous haemagglutinin-like n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSM3_9CHLB
Uncharacterized protein {ECO:0000313|EMBL:KEZ03285.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
conserved protein of unknown function; RTX toxins and related Ca2+-binding domain
berkeley_reactor_200306_planktonic_scaffold_310271_97
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

122835..124034
DNA (1200bp) protein (400aa)
Beta-galactosidase n=1 Tax=Bacteroides sp. CAG:443 RepID=R6ML38_9BACE
Beta-galactosidase {ECO:0000313|EMBL:CDB96734.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
Glycosyl hydrolases family 43.
berkeley_reactor_200306_planktonic_scaffold_310271_98
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(124075..125901)
DNA (1827bp) protein (609aa)
PA14 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL26_9BACT
PA14 domain protein {ECO:0000313|EMBL:EEF59520.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_310271_99
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(126233..128083)
DNA (1851bp) protein (617aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMJ2_9BACT
glucosamine/fructose-6-phosphate aminotransferase
berkeley_reactor_200306_planktonic_scaffold_310271_100
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(128249..128794)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037B56AD
D,D-heptose 1,7-bisphosphate phosphatase
Tax=GWF2_Verrucomicrobia_62_7_curated
berkeley_reactor_200306_planktonic_scaffold_310271_101
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128924..130213
DNA (1290bp) protein (430aa)
6-phosphofructokinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C37FF
6-phosphofructokinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
berkeley_reactor_200306_planktonic_scaffold_310271_102
unknown

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130297..130416
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying items 91-105 of 105 in total

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