ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_310271_90

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 109224..110060

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH65_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 280.0
  • Bit_score: 263
  • Evalue 1.70e-67
peptidylprolyl isomerase, FKBP-type similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 230.0
  • Bit_score: 221
  • Evalue 1.60e-55
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 228.0
  • Bit_score: 264
  • Evalue 1.10e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 837
ATGAACAGCACAAAAAAACTTATCCTTGGACTATTCGTGTGCTTCGGCACGGCGGCGGTTTTAAAAGCCGACGGCACCAACCAGCTTGCCGATGAAAAATCGCGCGTCAGCTACGCCATCGGCATGATGCTCGGCCATAACTGGCAGCAACAAGGGCTCGAAGTGGACCCGGATATTTTTGCCCGCGCCGTCAAAGACATCCAGGCCGGCGGAAAAACCCTGCTCACCGAGCAGGAGATGCACGAAACCCTCGTCAGCTTCCAGAAGGAATTCGCCGCCAAACAACAAAAGCGCCGCGCCGAACTGGCGGAAAAAGACAAGCAGGAAGGCGAGGCGTTTCTCGCCGCCAACAAGGAAAAGCCCGGCGTGCAGACGCTGCCCGACGGCTTGCAGTATCTGGTGATCACCAACGGCACCGGCCCGGTTCCCGGCCCGAATGACACCGTGACCGTCAATTATCGCGGCACGCTGATCAACGGAACGGAATTCGACAGCTCCTACAAACGCGGCCAGCCGGCGCAGTTCCCCGTGGGCGGCGTCATTCACGGCTGGACCGAAGCACTGGAGAAAATGCCCGTCGGCTCCAAATGGAAATTGTTCATTCCCGCCGGCCTCGCCTACGGCGAACAGGGCAACCGCGGCATCCCGCCGAACTCCACCTTGATCTTTGAAGTGGAGTTGCTGGACGCCAAAAGCCCCGCCCCGCCGAAAGCCGCCGCGCCCCTGACGAGCGACATCATCAAAGTGCCGTCCGCCGAGGAAATGAAAAAAGGCGCCAAGATCGAAGTCATCAAATCCGATGAGGCCGCCAAGGCGGAGCAGCAAACCAACAAATAA
PROTEIN sequence
Length: 279
MNSTKKLILGLFVCFGTAAVLKADGTNQLADEKSRVSYAIGMMLGHNWQQQGLEVDPDIFARAVKDIQAGGKTLLTEQEMHETLVSFQKEFAAKQQKRRAELAEKDKQEGEAFLAANKEKPGVQTLPDGLQYLVITNGTGPVPGPNDTVTVNYRGTLINGTEFDSSYKRGQPAQFPVGGVIHGWTEALEKMPVGSKWKLFIPAGLAYGEQGNRGIPPNSTLIFEVELLDAKSPAPPKAAAPLTSDIIKVPSAEEMKKGAKIEVIKSDEAAKAEQQTNK*