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berkeley_reactor_200306_planktonic_scaffold_310271_81

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(100190..100951)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator id=12554241 bin=CNBR_ACIDO species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 247.0
  • Bit_score: 312
  • Evalue 2.20e-82
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EMI21259.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 237.0
  • Bit_score: 251
  • Evalue 8.60e-64
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 249.0
  • Bit_score: 246
  • Evalue 5.60e-63

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Taxonomy

Rhodopirellula maiorica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 762
ATGTCGTCCGCCCAACAACTCCAATCGGAACTGTTTTCCCGTCTGGCCGAGCCTTTCACCGGTGAAGCCCTGTTCGACTGCCTGCCGGACCTCGTTTTCTTCATCAAGAACCAACGCGGCGAATACGTGGTGGTGAATCAAACCCTGGTTGGGCGCTGCGGCCGGCGCACCAAGGAGGAATTGATCGGGCGGCGGCCGGATGAACTTTTCCCCGCGCCGCTCGGGGACAGTTATCGCGCGCAGGATGAAAACGTGCTCCGTCACGGCGCACCCATTCTCAACCAGCTCGAACTCCATTTTTATGCTGTCGGCGGACGCGGCTGGTGTCTGACAAACAAACTGCCGTTGCGCGACGCGGCCGGTCGTGTGGTTGGTTTGACGGGCGTGTCCAAGGATTTGCAGGCGGGCAATGAGCGCGGCGAAGATTTTTCCGCCGTGGCCGAGGCGGTGCAGCAGATCAAACATCATTTCGCCGAACCGCTGCGCGTCAAGGACCTGGCCGCGCGCACCGGTTTGTCGGTTTATCAATTTGAACAGCGCATCCGCAAAATCTTCCAGCTCACCGCCGGGCAGCTCATCCAAAAAACCCGCATGGAAAACGCCGTGCGCCGGCTGCGCGAAACGAATGATGCCATCGCCATGATTGCGCTGGACTGCGGGTATTCCGACCAAAGCGCCTTCACCCGCCAGTTCCGGCAAACCGCGGGCCTGTCGCCCACGGAATACCGCGAAGCCTGCGGCAAACGGTTTTCGGCGGCGTGA
PROTEIN sequence
Length: 254
MSSAQQLQSELFSRLAEPFTGEALFDCLPDLVFFIKNQRGEYVVVNQTLVGRCGRRTKEELIGRRPDELFPAPLGDSYRAQDENVLRHGAPILNQLELHFYAVGGRGWCLTNKLPLRDAAGRVVGLTGVSKDLQAGNERGEDFSAVAEAVQQIKHHFAEPLRVKDLAARTGLSVYQFEQRIRKIFQLTAGQLIQKTRMENAVRRLRETNDAIAMIALDCGYSDQSAFTRQFRQTAGLSPTEYREACGKRFSAA*