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berkeley_reactor_200306_planktonic_scaffold_310897_37

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(51597..54392)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 839.0
  • Bit_score: 1177
  • Evalue 0.0
DNA topoisomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL73_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 839.0
  • Bit_score: 1177
  • Evalue 0.0
DNA topoisomerase III similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 845.0
  • Bit_score: 1109
  • Evalue 0.0

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2796
ATGGGCAAATCACTCATCATCGCCGAGAAACCATCGGTCGCCAGCGACATCAGCAAGGCGCTCGGAAAATTTCAGAAGCACGACGACTATTTCGAGAATGACGACTACGTCATTTCGTCCGCCGTCGGGCATTTGCTGGAATTGATCGTGCCGGAGGAATTCGACGTGAAAAAGGGCAAATGGACCTTCAAATGCCTGCCCGTCATCCCGCCGCGCTTCGCTCTCCAGCCGATTGAACGCAATGAAAAGCGCCTGAAAACCCTGGCGAAACTGATCAAACGCAAGGATGTGGACACGCTCGTCAACGCGTGCGACGCCGGGCGCGAAGGCGAACTCATCTTCCGCAACATCGTCCGTTTTACCGGCGCCCAACAGCCGGTGAAACGGCTCTGGCTCCAATCCATGACGCCCACGGCCATCCGGGAGGGATTTGCCGCGCTGAAGACGGACGCGGAAATGCTGCCGCTTTCCGACGCTGCGACCAGCCGCGCCGAAGCGGACTGGCTGGTGGGCATCAACGGCACGCGGGCGATGACTGCGTTCAACTCGAAGCTGGGCGGATTCTTCAAAACCACGGTCGGGCGCGTGCAGACGCCGACGCTGGCGATTGTGGTGGAACGCGAGGCGAAAATCCGCGCTTTCAAGCCGCGCGATTATTGGGAGGTCATCGGCACCTTTGACTGCGCCGCCGGCCAATACACGGGGCGCTGGTTCGATGAAAAATTTTCCAGGTCCGAGGATGATCAACTCAAGGCGGAACGGCTTTGGGACCAGGCGGCCGCCGAGGCGCTTCGCGAAAAATGCCTGGGCAAACCCGGCGTCGTCACTGAAGAAAGCAAGCCGACCACTTCAATGTCGCCGCTGCTCTACGATTTGACGAGTCTGCAGCGCGACGCCAATTCGCGCTTTGGTTTCAGCGCCAAAAACACGCTCGCCATCGCGCAGGCGCTTTACGAAAAACACAAGGTGCTCACCTATCCGCGAACGGATTCCCGCGCGTTGCCGGAAGATTACCTCGGCACGGTGAAGAACACGCTGGCCATGCTGGAAGGCGTCACGGGGTATTCCACCTTTGCCGACCAGATTTTGAAAAGCGGCTGGGTGCGCCCGAACAAACGCATTTTCAACAACGCGAAAATTTCCGATCACTTCGCCATCATCCCGACGTCGCTCGCGCCCAGGACCATGAGCGAACCGGAGCAGAAACTTTACGATCTGGTGACGAAACGCTTCCTGGCCATTTTTTATCCGGCGGCGGAATTTCTCGAAACCACGCGCATCACGCGGGTGGCCGACGAACCGTTCAAAAGCGCGGGCAAGGTTTTGATCGCGCCCGGCTGGCTGACGGTTTACGGCAAGCAATCGGATTCGGATGAAACCCCGAGTCTGGCGCCGGTGAAGCCGGACGAAACGGTCAAAACCAGCGAGGTCGAGGTGAAGCAAAACGTCACCAAACCGCCGGCCCGCTACTCGGAAGCCACGCTGCTGTCCGCGATGGAAGGCGCGGGCAAGCTGGTGGACGACGACGAATTGCGCGAGGCGATGAGCGAAAAAGGCCTGGGCACGCCGGCGACGCGCGCGGCGATCATCGAAGGGCTGCTGCTGGAAGGCTATCTGCTCCGCAACGGCCGCGAGTTGCAGGCCACAGCCAAGGCGTTTTCGCTGATGGAATTGTTGAACGGCCTGGGCATTCCCGAATTGACCAAACCGGAGCTGACGGGCGGCTGGGAATTCCAGTTGAAGGAAATGCAGCGCCGGAAAATCAGCCGCGAACAGTTCATGACGGGCATCGCGGACATGACGCGCAAAATTGTGGAGCGCGCCAAGTCGTTCGAGCACGACACGATTCCCGGCGATTTCGGCACGTTGAGCGTGCCGTGTCCCAAGTGCGGCGGCGAAATTCACGAGAAATACAAGCAGTTTCAGTGCGTGAACCCCGGCTGCGATTTTGCGGTTTGGAAGACGTTGTGCAGCCGGATGTTTGAGCCGGAGGAAGTGGAGCGGCTCATCACCGAAAAACAGATCGGGCCGCTCCAGGGCTTCCGCAGCAAGCAGGGTTTTCCGTTCGCCGCCGTGCTCAAGATGAACGCCGAGCACAAGGTGGAATTCGATTTTGGCAACGCGAAGGAGGGCGAATCCGCCGAGCCGGTGGATTTCACCGGCAAGGAACCGCTCGGCAAATGTCCGAAATGCGGCGCGAATGTCTATGACGGCGGGATGAATTATGTCTGCGAAAAACAGACGGGTTCCGCGCCGACGTGCAATTTCCGTTCCGGCAAAATCATCTTGCAGCAGGAAATCGCGCCGGAGCAGATCCGCAAATTGCTCGCTGAGGGCAAGACGGATTTGTTGAAAGGTTTCGTTTCCAAGAAGACGAATCGCAAGTTCGAAGCGTTTCTCGTTGTGAAGGACGGCAAGACGGCGTTTGAATTTCCCGTGCGCGAAGGCAAAGGCCGTCGCAAGAGCAGCGAGCCGCCGCCGAAGCTGGATTTCACCGGCAAGGCGGAGGTGGGCGTTTGCCCGAAATGCGGCGGCAAGGTGTTCGACACCCAGACCGACGCGGGTTATGTCTGCGCAAACTCGCAGCGCGAAACCAAGCCGTGCAAGTTCAGCATCAAGCAGACGATTCTGGAACAGCCCATCGCCCCGGAACAGGCGCGGAAAATTCTCGCCGCCAAGAAAAGCGATCTGCTGGACAAGTTCATTTCCAAGGCGGGCAAGCCGTTTCCGGCGTTTCTGGTGATGGATGCCAAGGGCAAAATCACCTTCGATTTCCCGCCGCGGGAGGACGAATAA
PROTEIN sequence
Length: 932
MGKSLIIAEKPSVASDISKALGKFQKHDDYFENDDYVISSAVGHLLELIVPEEFDVKKGKWTFKCLPVIPPRFALQPIERNEKRLKTLAKLIKRKDVDTLVNACDAGREGELIFRNIVRFTGAQQPVKRLWLQSMTPTAIREGFAALKTDAEMLPLSDAATSRAEADWLVGINGTRAMTAFNSKLGGFFKTTVGRVQTPTLAIVVEREAKIRAFKPRDYWEVIGTFDCAAGQYTGRWFDEKFSRSEDDQLKAERLWDQAAAEALREKCLGKPGVVTEESKPTTSMSPLLYDLTSLQRDANSRFGFSAKNTLAIAQALYEKHKVLTYPRTDSRALPEDYLGTVKNTLAMLEGVTGYSTFADQILKSGWVRPNKRIFNNAKISDHFAIIPTSLAPRTMSEPEQKLYDLVTKRFLAIFYPAAEFLETTRITRVADEPFKSAGKVLIAPGWLTVYGKQSDSDETPSLAPVKPDETVKTSEVEVKQNVTKPPARYSEATLLSAMEGAGKLVDDDELREAMSEKGLGTPATRAAIIEGLLLEGYLLRNGRELQATAKAFSLMELLNGLGIPELTKPELTGGWEFQLKEMQRRKISREQFMTGIADMTRKIVERAKSFEHDTIPGDFGTLSVPCPKCGGEIHEKYKQFQCVNPGCDFAVWKTLCSRMFEPEEVERLITEKQIGPLQGFRSKQGFPFAAVLKMNAEHKVEFDFGNAKEGESAEPVDFTGKEPLGKCPKCGANVYDGGMNYVCEKQTGSAPTCNFRSGKIILQQEIAPEQIRKLLAEGKTDLLKGFVSKKTNRKFEAFLVVKDGKTAFEFPVREGKGRRKSSEPPPKLDFTGKAEVGVCPKCGGKVFDTQTDAGYVCANSQRETKPCKFSIKQTILEQPIAPEQARKILAAKKSDLLDKFISKAGKPFPAFLVMDAKGKITFDFPPREDE*