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berkeley_reactor_200306_planktonic_scaffold_310897_53

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 78185..81415

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017449FC similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 612.0
  • Bit_score: 216
  • Evalue 9.30e-53
Histidine kinase {ECO:0000313|EMBL:EDY20576.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.7
  • Coverage: 595.0
  • Bit_score: 201
  • Evalue 5.70e-48
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 247.0
  • Bit_score: 158
  • Evalue 8.50e-36

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3231
ATGCAAATGCCCGGAAAATTGATTTTTGCGCTGGCAACAACCTTGCATGCCTTGATCTTTGTCGCGAAAGGTGCCAGCCCGTTGCTGGCGCTTCCAGCGGTCCACGAATCCGCCATCTGGGTTACCAATGTGGCGCAGTTCAGATCCCTGGCCCCGGCAGATTTTCTCGCGGGCTGTGACTTTCATTTGCGGGGTGTAGTCACCCTGGTTGACACCAATCGAAATTTATTTGTGTTGCAGGATGCGACCGGCGCGGCGGCCTTCAGTTATCCGATCGCCGGCAAAGATTTATTCATCGGACACGAGGTGACTTTGGCCGGCACCAACTGCTGCCCGCTAAATGCAAGTTTTCCAAGCTATCCCTATCATCCGTCCGGCGGGGATATTCAAAGCGCGTTTGAGGCGCCCACAAATTGGGGGGAGTATCATTTAACCCAGATGTCCGGGCTGCTCACGCCACCGGTCAGCGGCAACTACCGGTTTTGGATCGCGAGCGACAACTCCTCGGAACTGTGGTTGAGCACGGACGCGAGCCCCTCCAAAATCAGACGCATCGCGGCCGTTCCGCGCTTTGGTTACACAGACCCCCGTCAATGGTCCCGCTTCCCGTCCCAGGAATCCGAACCGATCCTGCTAAAGGCCGGTCAGCCTTACTATATCGAGGCCCTGCAAGAGCAGACCGCCCAGGCGGAGAATCTCGCGGTCGCCTGGCGCGTCCCCGCCACGAACGCATCCCCCATAAACATCATTGACGGACAATATCTAACTCCATGGCCCGGCGAAGCGGTGAAGATAAGTTCCTTGACTCATGGCATTTTACGCGAGTATTGGACCAATTACACCTCGGCGGATTTGACCGGGTTGGCGGGCACGCGTCCTTACGAATCAGCGCTCAGCGTCCGGCAAATGACCATCACCGATCATGGCACCGGCCAAATGCCCGAACCAACGTTCATCATCCTGAGCCAGCCAATGTCCCCGAAAAACAACTACCGCTGGGTGCGGGCCGAAGGTCTGGTCAAATTCAAGGCGGTTGACGCGAACGGGTGTGTGCTGGAAATCACGGATGGCTCGACCCGCACAACCGTGCATGTCGTGGATGCCAATCCGGTGGCCATGGCGGGTTTGAGCAACGTTGCCGTCCAGGTGACGGGCGTCTGCGAGGCAATCAGCGATCGCAACGACCAATTGGTGCCGGGCTTGATCTGGGTTACCACGGAAGGCGCCGTGTGCCGTCTGGCCAATGCAACCAATGTCATCGGCAAAGTTACCCTGAAATCCACCGATTCCATGGCCACCAACACCAGTTCAACCATGCAGGGATTTTATGGAACAAGCGGTGTCGTGACGTTCGCCGACCGGTTGTTCAATCAGGACTACATCTTCATCCAGGAAAATTCGGCGGTCATGCGGGTTGACATTGCGAACCGGCCCTTTACAAGCCAGTTAAAAACGGGTTGCCGGGTCAACCTGGGCGGCCTTTTGCAGCCGGACAAAACTCCGCCCGTCATCACACCGGTTTACGTTGCCCCGTTGGGACGACAGGCCCTGCCCAAGCCAGTGTCACAACCGCTGGCTTTGTCAGGCACCGCGAATTTGGACGGAAAATGGAGTGAGTTGGAGGGAGTGGTGCATTCGGTAAACGCCAGGCGGACTCTCTCCATCACCACCAAGGATGGAACCGCGCACTTATGGCTGGGACAAACGCCGACCAATCAATTGAGCCGGTATGTAGATGCCAAAGTTTGCGCCCGGGGTGTCTTTATCTCAAAGCTGGGGGATGCCCCCGCCTTGCTCATCCCCTCCCGGGATTTTCTGGAGGTGCTGGAGGAACCACCGGCCGCCCCCTTTAAAATCGCCCGAACTCAAATCGCCGCCATCCTCAAGGGAGATTCCGGATCGCCCTGGGAACATCGGGTTCGCGTGGTCGGAGAAATTACGTATCGCAATGAACACTCCTTCTTCATCCAGGATTCCTCCGGTGGCATCCGGGTGCAAACCACCGGCCAACCGGCGGCACAGGTTGGTGACTCCCTTGAATTGGTTGCCTTTCCAAGAATCGCCGGGGTGGAACGAACCTTGACCGATCCGGTCATGCGGCCAGGGCTGACGCCGGGAAAAATTTATCCCCAAAAATTGGATTTGAGCGACGTGATAGCCTCCAGTCAAAAGGGTCTGCTGGTGGCTGTCCGGGCGACGTTGCTTTCGCAGAAAGCCAACGGAAACGAGCAAACGCTGCAATTGCAACAGTCCCAGCACGTGTTTGAAGCTGTGCTGTCCGCCCGCCAAGGAAAATTGCCCAAGCTGATCGCCGGCAGCCAGCTGCGACTCACGGGAGTGTGCGATGACGGCATGTCCACGGTATTGAACGCGGGTGAAAAGAATGCCGGCAGACAATTCCTTCCCGCGTTAAAAATTTTATTGCGTGCTCCCGAAGACGTCAAATTGTTGAGCGGCCCTCCGTGGTGGACTTGGAAAAAAGCGGCCACGCTCGTGGCGATATTATTGACCATTCTGGCCGTGGCTTTGTCATGGGTTCACCTGCTGCAACAGCGGCTCAAACGGCAGAAGGCGGCGCAGCTGGCATTCTCACGGCATGTCTTTGGGAAACTGGAAGAGGAACGCAGCCGCATTGCCAGTAATTTGCATGACAGTCTCGGCCAGATGTTGCTGGTGATCAAGAATCACACCCTGGTGGCCTCGCAACTGCCTGCCGAGGATGACGGCTTGCGCGGCCGGCTGGATGAAATCTCCGGCACCACCACCCAGGCCATCGAAGAAGTGCGCCGGATCACGCGTGATTTGCGACCTTATCAATTGGACCGGCTCGGCCTGACCCAGGCCATGCGAACGCTGGTTGACAAGGCTTCGAAAAACAAGGCCATATCGTTTGCCAGCCGCGTCGAGGATATTGACAACACCTTTGATAAAGACGCGGAGATACATGTGTATCGCATCGTCCAGGAGTCCATCTCCAATGTCGTAAGACATTCGGCGGCGACGGAAGCCGCCGTCGTTGTCAAGAAACGGCCAACAACCGTATTGTTCTCCATCCGCGACAACGGCTGCGGTTTCGATCCCGCCAGACCGGATGCGCAGTCACGCGAGCTTGGATACGGCCTCACTGGCATCGCGGAAAGGGTGCGGATCCTTTCCGGGACGCTGCTTATCGAATCCAAACCCGGCAGCGGGACCAGCTTGTCGGTTGAAGTTCCATTTAGAACCGGGTAA
PROTEIN sequence
Length: 1077
MQMPGKLIFALATTLHALIFVAKGASPLLALPAVHESAIWVTNVAQFRSLAPADFLAGCDFHLRGVVTLVDTNRNLFVLQDATGAAAFSYPIAGKDLFIGHEVTLAGTNCCPLNASFPSYPYHPSGGDIQSAFEAPTNWGEYHLTQMSGLLTPPVSGNYRFWIASDNSSELWLSTDASPSKIRRIAAVPRFGYTDPRQWSRFPSQESEPILLKAGQPYYIEALQEQTAQAENLAVAWRVPATNASPINIIDGQYLTPWPGEAVKISSLTHGILREYWTNYTSADLTGLAGTRPYESALSVRQMTITDHGTGQMPEPTFIILSQPMSPKNNYRWVRAEGLVKFKAVDANGCVLEITDGSTRTTVHVVDANPVAMAGLSNVAVQVTGVCEAISDRNDQLVPGLIWVTTEGAVCRLANATNVIGKVTLKSTDSMATNTSSTMQGFYGTSGVVTFADRLFNQDYIFIQENSAVMRVDIANRPFTSQLKTGCRVNLGGLLQPDKTPPVITPVYVAPLGRQALPKPVSQPLALSGTANLDGKWSELEGVVHSVNARRTLSITTKDGTAHLWLGQTPTNQLSRYVDAKVCARGVFISKLGDAPALLIPSRDFLEVLEEPPAAPFKIARTQIAAILKGDSGSPWEHRVRVVGEITYRNEHSFFIQDSSGGIRVQTTGQPAAQVGDSLELVAFPRIAGVERTLTDPVMRPGLTPGKIYPQKLDLSDVIASSQKGLLVAVRATLLSQKANGNEQTLQLQQSQHVFEAVLSARQGKLPKLIAGSQLRLTGVCDDGMSTVLNAGEKNAGRQFLPALKILLRAPEDVKLLSGPPWWTWKKAATLVAILLTILAVALSWVHLLQQRLKRQKAAQLAFSRHVFGKLEEERSRIASNLHDSLGQMLLVIKNHTLVASQLPAEDDGLRGRLDEISGTTTQAIEEVRRITRDLRPYQLDRLGLTQAMRTLVDKASKNKAISFASRVEDIDNTFDKDAEIHVYRIVQESISNVVRHSAATEAAVVVKKRPTTVLFSIRDNGCGFDPARPDAQSRELGYGLTGIAERVRILSGTLLIESKPGSGTSLSVEVPFRTG*