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berkeley_reactor_200306_planktonic_scaffold_107672

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_107672_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..508
DNA (507bp) protein (169aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIK3_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW02856.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_107672_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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513..1259
DNA (747bp) protein (249aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMC2_CHIPD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEV99344.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_107672_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1338..2393)
DNA (1056bp) protein (352aa)
Conserved repeat domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ2_NIAKG
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:AEW00739.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_107672_4
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2440..4557)
DNA (2118bp) protein (706aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031043A6
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
berkeley_reactor_200306_planktonic_scaffold_107672_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4761..6707
DNA (1947bp) protein (649aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9Z2_CHIPD
histidine kinase
berkeley_reactor_200306_planktonic_scaffold_107672_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6707..7357
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQW5_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEV97864.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_107672_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7390..8013)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6Q4_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96115.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
berkeley_reactor_200306_planktonic_scaffold_107672_8
unknown

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8109..8219
DNA (111bp) protein (37aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_107672_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(8226..8423)
DNA (198bp) protein (66aa)
CHU large protein id=3713838 bin=GWF2_Bacteroidetes_35_48 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 9 items

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