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berkeley_reactor_200306_planktonic_scaffold_4941_95

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(91013..91702)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, DeoR family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11X99_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 229.0
  • Bit_score: 313
  • Evalue 9.10e-83
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KIA91204.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 229.0
  • Bit_score: 327
  • Evalue 8.50e-87
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 229.0
  • Bit_score: 313
  • Evalue 2.60e-83

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 690
ATGAACCGCATCGACCGCCTACTCGGCATGCTCACCTTTCTTCAGTCCCGGAAATATGTAAGCGCCGAAAAAATAGCGGAGAAATTCGAGATCAGCGTCAGGACCGTATACCGCGATATTAAGGCTTTATGCGAACAGGGTATCCCGATCAGTTTCGAGCAGCACAAAGGATACTTCGTCGTTCAGGGGTATTTCCTGCCGCCGGTTTCCTTTAGCAATGAAGAGGCCAATGCCCTGCTGCTCATCGAAGCCCTGGTCAGCGGTTTTGCCGACCGGTCCATACAAAATCATTATGCCACCGCGCTCAATAAAGTAAAGGCGGTGCTGCGCCATACCCAAAAGGAAAAGCTGGAGCAACTGCATCCCAACATCCGCCTGCAGGTACCCAAACGGATCATGAACGACCTGGAGTACCTGTCGGTGCTGCAGGAGGCCATCAGTTCGAAATATATACTGGCCATAGAATATAAAAACAATAAAGAAGAGATCAGTAACCGGCGCTTAGAGCCTATCGGGCTTATTTTTTACGCCTTTAGCTGGCACCTGATCGCCTGGTGCCACCTGCGTAGCGAATACCGCGATTTTAAGGTAGCCAGTATTATCCGGGTTAAAAATACCCAGGAGGCCTTCCTGCGCCAGGATCATATCTCGCTGAACGAATATACCAAAATGCTGCCGGTAGACTATTAA
PROTEIN sequence
Length: 230
MNRIDRLLGMLTFLQSRKYVSAEKIAEKFEISVRTVYRDIKALCEQGIPISFEQHKGYFVVQGYFLPPVSFSNEEANALLLIEALVSGFADRSIQNHYATALNKVKAVLRHTQKEKLEQLHPNIRLQVPKRIMNDLEYLSVLQEAISSKYILAIEYKNNKEEISNRRLEPIGLIFYAFSWHLIAWCHLRSEYRDFKVASIIRVKNTQEAFLRQDHISLNEYTKMLPVDY*