ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_4941_97

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(92145..92870)

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLG6_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 236.0
  • Bit_score: 256
  • Evalue 1.40e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 240.0
  • Bit_score: 256
  • Evalue 5.10e-66
Putative periplasmic protein {ECO:0000313|EMBL:ESU25225.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 236.0
  • Bit_score: 256
  • Evalue 1.90e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
TTGATTTTTATCGGTATCGCGCTGTTCTGGCTGGCAGCCGGTTTTTACCTTTTCAAAAAAAGCCGCACAGCCGACGACGATCGTTTTATCAGTTATACCGCCGATACGCGTACAGAGCAAATCCGTATGTATTGGAAAGATGAACAGGGAAGGAATTTCAGGAACATCGGCAACCTGCTGGCCTGGGCCGGACAACACCAGGTAACCTTTTCTTTTGCCATGAACGGCGGTATGTACCAACCCGATTTTAGCCCCGTGGGCCTTCTCGTAAGGGAGGGTATACAGCTCCAGCCCGCGGATACGGGCACAGGCGAAGGCAACTTTTACCTGAAGCCCAATGGCGTTTTCTTTACCCGGCCCGACGGTACTGCCGGCATCTGCACCACGCAGGATATAGGCCGCTCCGGGTCTATGGCCTATGCCACCCAATCAGGTCCGATGCTGGTACTCGACGGTAACCTCAACCCGGCATTCAAACAGGATTCAGCCAACCGGGAGGTGCGTAATGGCGTAGGTATTTTGCCCGATGGCAAAGTACTTTTCGCATGCTCCAAAAAAGCGATAAGCTTTTATGATTTTGCCAGCTATTTCAAAACTATGGGTTGTAAAAATGCCTTATACCTGGATGGACAAGTGTCCAGAACTTATTACCCGGCCAGGCAATGGGAGCAAAAAGACGGCGACCTGGGCGTTATTATCGGCGTAAGCCCTAAATCCAATCCTTAA
PROTEIN sequence
Length: 242
LIFIGIALFWLAAGFYLFKKSRTADDDRFISYTADTRTEQIRMYWKDEQGRNFRNIGNLLAWAGQHQVTFSFAMNGGMYQPDFSPVGLLVREGIQLQPADTGTGEGNFYLKPNGVFFTRPDGTAGICTTQDIGRSGSMAYATQSGPMLVLDGNLNPAFKQDSANREVRNGVGILPDGKVLFACSKKAISFYDFASYFKTMGCKNALYLDGQVSRTYYPARQWEQKDGDLGVIIGVSPKSNP*