ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_4941_99

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(94338..94913)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional reguator n=1 Tax=Niabella aurantiaca RepID=UPI000375B042 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 187.0
  • Bit_score: 211
  • Evalue 5.30e-52
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 188.0
  • Bit_score: 204
  • Evalue 1.80e-50
Tax=BJP_IG2102_Bacteroidetes_40_9 similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 185.0
  • Bit_score: 206
  • Evalue 1.80e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2102_Bacteroidetes_40_9 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGATACTGCATATTAAAAACATGGTATGCCACCGTTGCCGGATGGCCGTAGAAACGATACTGCAGCAACTGCAACTTCACCCGGTTGCCGTGACCCTGGGTGAAGCGGTTATCGAAGAAAAAGCACTCTCGCCGCAGCAGACAGAAGCCCTGCAAACTGCTTTATCGGCCGTAGGTTTCGAGCTGATGGATGATAAGAAGAGCAAGCTGATGGAGCAGATCCGTAAATTCATTATCGAAACGGTCCACTACTGCGAAGAACCCTCTCGACTTAATTTCAGCGAGCTACTGGCCAGGCATACCGGGCATGACTACTCTTATCTCAGTAAACTTTTTTCTGAAGTAGAAGGTATCACGATCGAACAATACCTGATCCGCCAGAAAATTGAAAAAGTAAAAGAACTGTTGCTGTACGACGAATTACCGCTTTCGCAAATCGCCTTCGACCTGGGATACAGCAGTACCGCCCACCTGTCGGCACAGTTCAAAAAAATGACGGGACTCACACCCACACAGTTCAAACAGATGGGCGCCCACTCCCGAAAATCGCTTGATGATATCGGTGGCCCGGCATAG
PROTEIN sequence
Length: 192
MILHIKNMVCHRCRMAVETILQQLQLHPVAVTLGEAVIEEKALSPQQTEALQTALSAVGFELMDDKKSKLMEQIRKFIIETVHYCEEPSRLNFSELLARHTGHDYSYLSKLFSEVEGITIEQYLIRQKIEKVKELLLYDELPLSQIAFDLGYSSTAHLSAQFKKMTGLTPTQFKQMGAHSRKSLDDIGGPA*