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berkeley_reactor_200306_planktonic_scaffold_4941_115

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(112757..113536)

Top 3 Functional Annotations

Value Algorithm Source
Two-component system response regulator n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GW70_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 246.0
  • Bit_score: 235
  • Evalue 3.60e-59
Two-component system response regulator {ECO:0000313|EMBL:EOR95770.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 246.0
  • Bit_score: 235
  • Evalue 5.00e-59
two component transcriptional regulator, LytTR family protein similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 252.0
  • Bit_score: 232
  • Evalue 8.50e-59

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Taxonomy

Arcticibacter svalbardensis → Arcticibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGCATACCCCTACGCATCAACTCAACTGCCTTATAGTCGACGACGAGCCGCTGGCCCAGGAAGTGCTTGCCGCCCACATCGCCAAGATTCCCTCGCTTAACCTGGTACAACAGTGCTCTAATGCTATGGAAGCATTCGAAGCCCTGCATAAAAACACGATAGACCTTATTTTTCTCGATATCAATATGCCCGTTGTCAGCGGGCTCAGTTTCCTGCGTTCGCTCAAAGATCCGCCTGCGGTCATCCTTACCACGGCCTATACTGAGTATGCCATGGAAGGTTATGAGCTCGACGTAGTCGACTACCTGCTGAAACCGGTACCCTTTGACCGTTTCTTCAAAGCCGTTAAAAAAGCCTTGCAACAATTGAGTCATACCGGCCGGGCGGTACCGGTAATCCAGGAAGAGCCCTCGCTGGGCATGCCCCTGCAGCAGGCCGTAACCCCGGTCAATACCGCCGAAAAGAATTACTTTTTTATCAAGGCGGATGGCAAACTGGTCAAGGTCAACTATGCCGATATCCGTTATATCGAAGGCATGAAAGACTACCTGAAGATCCATTGCGTCAACCAGAGTATCGTATCGCACCATACCATGAAGGCTATGGAAGAACAACTGCCTTCTGATAAGTTTATGCGGGTGCACAAATCGTATATTATCGCGCTGGGCGCCATAAAATCGATTGACGGCAATATCATTACCCTCGATATGGATAAGGCGGAAATACCACTGGGCAGCAGCTTCCGCGATGCCTTGCTGGCTACCGTAGCCAACCGCTAA
PROTEIN sequence
Length: 260
MHTPTHQLNCLIVDDEPLAQEVLAAHIAKIPSLNLVQQCSNAMEAFEALHKNTIDLIFLDINMPVVSGLSFLRSLKDPPAVILTTAYTEYAMEGYELDVVDYLLKPVPFDRFFKAVKKALQQLSHTGRAVPVIQEEPSLGMPLQQAVTPVNTAEKNYFFIKADGKLVKVNYADIRYIEGMKDYLKIHCVNQSIVSHHTMKAMEEQLPSDKFMRVHKSYIIALGAIKSIDGNIITLDMDKAEIPLGSSFRDALLATVANR*