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berkeley_reactor_200306_planktonic_scaffold_26454_157

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(170593..172755)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AB9CD similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 540.0
  • Bit_score: 201
  • Evalue 1.60e-48
conserved repeat domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 26.9
  • Coverage: 725.0
  • Bit_score: 190
  • Evalue 1.30e-45
Conserved repeat domain protein {ECO:0000313|EMBL:AEE20301.1}; TaxID=983548 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.9
  • Coverage: 725.0
  • Bit_score: 190
  • Evalue 6.70e-45

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Taxonomy

Dokdonia sp. 4H-3-7-5 → Dokdonia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2163
ATGAATGCGAAAAAATTACACGTTCCGGCCTGGAAAAGATCCCTTTGCCTGATAGCAGGAGGATTGACGTTGTCTATGGGAGTGAGCGCCCAGACCATCAAGAACTATGCGACCAATGCGATCGCGCATAGCACCGGGGGTAGCGGTTTTTACAATGTACCCGACTATCTTAATGCCTCCGATGGTAATGAAACCACCAGTGCTACCCTGAAGTCTACCACGGCTGCACTTGGCCTGTTCCCTACCCATTCTTATGTAGAAATGGGATTTGACGCAAATGTGCCTACCGGTTCTACAATTTATATCCCCGTGCAGGACGAGGCGGGCACCAATATCCTGAATACCCTGCTGAGTGGTAACATTGGTAATACCCTTTCTACAATACTGAGTGATCAGAGCTTTATCGTAGATGTAAAAAAGGCAAACGGTGCTACCGTAGCTACTTATAATACAACTAACGGCCAGGACAAAATATTTGCCGGCGGTAGCTTTAATATTGTAAGAGATGCCAGCAACCAGTTGTATGTTACCTTTATCCCTAACGCCGGTGCAGATATCCGCAGGGTCCAGATTACGGCACGTACAGGAGGTGCGCTGGGTGCAACTTATAACCTGAAGGTGCAGGACGCCTATTACTACAGCGGACCTGCAACACCCTGCGCCTACACGCTCACAACGGCGTTCGACGCAACGGGCGTTACCCTCTCCCTGTTAACGGCCAACGGTAACCCGGTACAGAATGCCCAGTTCGCTATCGATGCAGATACGACCAACTTCTCTACCTTCGGTTACGGCGTTGCCAATATCAATGTAGGCGCCACGTATATACAGGATATCTATTTCTCCAACTTATCCAACCCCGGCGACCAGGTAAAGATCAAGTTCCGCGTGCCGCCGGCCCTGCTGAACCTGTCTGTATTACAGAATATCAATATCAGCGCTTATAAAGGCAATACACAGATATTCAGCAGCGATCTCAACTCCGCAGTGGCTTTAGACCTGCTGGGACTGTTGAACGTGGCCCTGAACAATAACCTGCCGGGCGAAGTGCCCATCTCCCTGGGCGACAGCACCGTGCAGTTCGACAGGATCCGTATTTCCATGACCCAGCTGCTGAATGTAAATGCTTCGCAGATGTTGGAACTTTATGGTGTAAAGCGTGTGCCTGCACCGCCTAAAGTTGCCGCCGCAGCGATTGCCAGTTGTCCGGGCACCAGCCTGAAACTGATGGTAAATAACCCGGCCAGCGATCTGACCTATACCTGGTACAACAGCAGCAATGCTGTAGCCGGTACCGGTACTACCCTTGATATTGTTGCCCCGGCTAACGGTGTGAAAGATAGCTTTACCGTTCTGGCTTCCAGGTGTCCCGGTGCCCTGTCCGGGTCCACTAAAGTAGTGGTAACAGCTGCTACCGGTTCCTGTGTTGCCGTTGCGCCCGTCGCTTTCCTTGGCGGTGCCTACAGCTCCTCGCTGAACCGTCATAAAGATGTAACGAACGACTGGGCTATCCTGTTGCAGATCAGCGCTACGAACCAGCCTTATAACGTGGCGCCGTTTAACTATGCCGGCACAGAGTCCGTTCCGTTTTCTGTATTTACCGCTACAGGCGCCACCGACGATATCCTGGATTGGGTATTAATGGAACTGAAAGACAGTACCGGTAACCTGGTAGACCGCCGTGTAGCCTTCCTGCTTGAAAATGGTAATATCGTAAACATGGATAAAACACCGGTGGTTCCCTTTAAAGCGAATGCAGGCCGTTACCACCTCACGATCCGTCATCGTAACCACCTGGGACTGAGCACCGAGCTGATGAACTTTACAACAGGCTCTAACATTTTCAATTTTGGCAATGCTACCGATGCTACGCTGTATGGAACTGCCGAGGCCTATGCTGTGATGAACGGCAAGGTTTGCCTGATCGCCGGTAATGCAAACAGCAATGGCAACGTCCGTTACAACAGTACTGCCAACGATCGCGATGCAATCCTGTCTTACCTCGGTTTTTCGGAAGTAGGCATTACTACTAATGTGTACACACCTGCCGACGTAAACCTTGATGGTACCGTACGTTACAATGGTCGTGGCAATGACCGTGACTTCCTGCTGGAGGTGCTGAACTTTAACGAAACAGGCTTTATTGCCGAGCAAATTAAATAA
PROTEIN sequence
Length: 721
MNAKKLHVPAWKRSLCLIAGGLTLSMGVSAQTIKNYATNAIAHSTGGSGFYNVPDYLNASDGNETTSATLKSTTAALGLFPTHSYVEMGFDANVPTGSTIYIPVQDEAGTNILNTLLSGNIGNTLSTILSDQSFIVDVKKANGATVATYNTTNGQDKIFAGGSFNIVRDASNQLYVTFIPNAGADIRRVQITARTGGALGATYNLKVQDAYYYSGPATPCAYTLTTAFDATGVTLSLLTANGNPVQNAQFAIDADTTNFSTFGYGVANINVGATYIQDIYFSNLSNPGDQVKIKFRVPPALLNLSVLQNINISAYKGNTQIFSSDLNSAVALDLLGLLNVALNNNLPGEVPISLGDSTVQFDRIRISMTQLLNVNASQMLELYGVKRVPAPPKVAAAAIASCPGTSLKLMVNNPASDLTYTWYNSSNAVAGTGTTLDIVAPANGVKDSFTVLASRCPGALSGSTKVVVTAATGSCVAVAPVAFLGGAYSSSLNRHKDVTNDWAILLQISATNQPYNVAPFNYAGTESVPFSVFTATGATDDILDWVLMELKDSTGNLVDRRVAFLLENGNIVNMDKTPVVPFKANAGRYHLTIRHRNHLGLSTELMNFTTGSNIFNFGNATDATLYGTAEAYAVMNGKVCLIAGNANSNGNVRYNSTANDRDAILSYLGFSEVGITTNVYTPADVNLDGTVRYNGRGNDRDFLLEVLNFNETGFIAEQIK*