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berkeley_reactor_200306_planktonic_scaffold_69065_100

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 122165..122743

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000378C88F similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 172.0
  • Bit_score: 162
  • Evalue 2.80e-37
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KGE86358.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 182.0
  • Bit_score: 156
  • Evalue 2.20e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 169.0
  • Bit_score: 148
  • Evalue 1.20e-33

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Taxonomy

Phaeodactylibacter xiamenensis → Phaeodactylibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
TTGTCCGTAGCATTGGCATATAACAACGTCTCAGTAAAAACTGATGAACTTCAGGAGCTTATAGACGGGTGTATTCGCAACGAGCGAAGCGCCCAGGCGAAGATATATCACCTTTTCTACCCCCGGATGATGAGCATGGTAAAGCGGTATTTCCCCGAACCGGTTAACGCCGAAGAGATACTGAATAACGGCTTTTTGCGGGCATTCCAGAAAATGAACACCTTCTCTTTTAAGGGTTCGTTTGAAGGCTGGCTGCGCCGGATCGTCTTCCACGCCATCGCCGACTATGCATCTTCCAATGTCAAATACAAACAGAGCATTGTACTCGCAGAAAAAGATGAATTTGTGCATAAGGACCATGCCAACCAGCTTTATTATAACGACCTGCTGAAACTGGTACAGGAGTTACCAGAGGCTACCCGTATGGTATTTAATATGTTTGTGCTTGACGATATGCCCCATAAGCATATCGCCAAGACATTAGGAATCAGTGAAGGCACATCCAAATGGCATGTGTCCGAAGCGAGAAGAATGCTAAAAGAAAAAGTGGAGCAACAAAATTTACATTTAAAAAAATAA
PROTEIN sequence
Length: 193
LSVALAYNNVSVKTDELQELIDGCIRNERSAQAKIYHLFYPRMMSMVKRYFPEPVNAEEILNNGFLRAFQKMNTFSFKGSFEGWLRRIVFHAIADYASSNVKYKQSIVLAEKDEFVHKDHANQLYYNDLLKLVQELPEATRMVFNMFVLDDMPHKHIAKTLGISEGTSKWHVSEARRMLKEKVEQQNLHLKK*