ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_69065_102

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(124949..125596)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 202.0
  • Bit_score: 305
  • Evalue 5.60e-80
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 202.0
  • Bit_score: 305
  • Evalue 4.00e-80
ATP-dependent Clp protease proteolytic subunit similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 202.0
  • Bit_score: 305
  • Evalue 1.10e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 648
ATGAATCAATATAATCTCGCCCAGCTGGGCTTGCTGAATAAGAGCGAAGACGAAGAGGAAGAGGAAGAAAAACCAGTCATCGACAAGCCCTCTCCGATGGGGATGATGGCCAAGAAGTCTGAAGAGATGTTCTTTAAAAACCGTACCGTATACCTTTGGGGACCGGTAGAGGACAAATCGGCGAAAGACGTGGTTTCCAAACTGCTGTTGCTCGACGCCGATAAACCTGGTAAAGAAATTAAGTTCTATATCAATAGCCCGGGTGGTGTGGTAACCAGCGGTATGGTGATCTACGATGTAATGCGTATGATCAAGTCGCCGGTATCTACCATCTGTATGGGATTGGCTGCCAGTATGGGTTCTATCCTGCTGGCCGGCGGCGAAAAAGGCAAACGCTTTATCTTCCCGCATGGCGAAGTGATGATCCACCAGCCAAGCCTGGGTGGTTATTTCCAGGGTGTATCTGCCGACCTGGAAATCCATGCGCACCAGATTCAGAAGACCAAAGAACTGGGCGCCAAAATCCTTTCTGAAGCCTGCGGACAGCCTTTCGAAAAAGTGCTGAAAGACCTGGAACGCGACTACTGGATGGATGCCGCCGAAGCCCTGAAATATGGCATCGTCGACAAAGTTGTTGATAAACTGTAA
PROTEIN sequence
Length: 216
MNQYNLAQLGLLNKSEDEEEEEEKPVIDKPSPMGMMAKKSEEMFFKNRTVYLWGPVEDKSAKDVVSKLLLLDADKPGKEIKFYINSPGGVVTSGMVIYDVMRMIKSPVSTICMGLAASMGSILLAGGEKGKRFIFPHGEVMIHQPSLGGYFQGVSADLEIHAHQIQKTKELGAKILSEACGQPFEKVLKDLERDYWMDAAEALKYGIVDKVVDKL*