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berkeley_reactor_200306_planktonic_scaffold_69065_109

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(130572..132470)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, subunits gamma and tau n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSN6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 651.0
  • Bit_score: 540
  • Evalue 2.20e-150
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:KIC92809.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 647.0
  • Bit_score: 550
  • Evalue 2.90e-153
DNA polymerase III subunits gamma and tau similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 651.0
  • Bit_score: 540
  • Evalue 6.10e-151

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1899
ATGTCGGAACAGTACATCGTGTCAGCCCGTAAATACCGTCCTCAAACATTTGACACCGTTGTTGGGCAGCAACATATTACCACCACGCTTAAGAACGCTATACGTACGCAACACCTTGCGCATGCTTACCTGTTTTGCGGTCCGAGGGGTGTGGGTAAGACTACCTGCGCGCGTATCCTGGCCCGTACGATCAACTGCGAAAACCCGACACCGGATATGGAAGCCTGCGGCACATGCAGCACCTGTCTTTCTTTCCAGGACAATACCTCCTTTAATGTTTTCGAACTCGATGCGGCGAGTAATAACTCGGTAGACGATATCCGTTCGCTTACAGAACAGGTACGCTACGCGCCGCAGCACGGAAAATACAAGATCTATATTATCGATGAGGTGCACATGCTCAGCACCGCGGCCTTCAACGCGTTCCTGAAAACGCTGGAAGAGCCGCCTTCCTACGCTATTTTTATCCTGGCTACTACCGAGAAACATAAGATCCTGCCGACCATTCTCTCGCGTTGCCAGATATTCGATTTTAAAAGGATACAAACCGAAGACATCGTAGGGCACCTTGCTTCGATCTGTAACAAAGAACAGGTGGTGGCCGAAAATGCCGGACTGCATATCATTGCGCAGAAAAGCGAAGGTTGTATGCGCGATGCGTTGTCGATGATGGACCGTATCGCCGGTTTTACCAATGGGCAACTTACCTATGCACAAACCGTAGAACACCTGAACATACTCGATGCCGACGTATACTTCAAGCTGGGTGATGTATTGCTGAGCAAAGATGTAGGCGGTGCGTTACTGCAGCTCGATAACGTATTGCAGCGCGGCTTCGAGGGCGATGTAATCCTGAACGGCTTTGCCGAACACTTCCGAAACCTGTTGCTGAGTAAGGATGGCCGTATGGCCCGCCTGCTCGATGTGCCGGAAGATCATAAACGTATTTATTTCGAGAAAGCGCAGATTATTCCTGCCGACTATATTTTATCCGCACTCAGTATTTTAAACGATGCGGAAATGGGCTTCCGTACCGCCCTCAACAAGCGGTTGCATATCGAGCTTTGCCTCATCCGGCTCTGTTACGTCAACGATATGCTGAGTCCCGCTGCATCTGCCGATGCGGATGCAAAAAAAAAACGGCTTGAACCAGGTAATGGGCTAGCCGGCACTGCGCCAGCGCCCACTCCGGTTGCGCCTCCTCCTGTAGTACAGCCTGTGGCGACCCCGGTTATGAACCCCGTTACGCCGCCGCCTGCTCCGCAACCAGCGCCGGTAATGCCGCCGGTACAGGCACAGCAACCTCCGGCACAACCTGCTTATACCCCGCCGCCGGTAATGCAACCCGCTGCGGTGGTATCTGAACCGGCTCCCCCCGTTTATAGTAATAATACCGCAACGGTTAATAATGCCGCATCGGCTATTCCCGACCTGGCCCGGAAACCCAAGCTGGGCCGCAATTTCCTGCAGGATATCCATACCCAGATCGGGCAACAGGTAGAAGATGCCGGCGAACGTATGGTGCTGGACCAGCAGAACGTGGAGCAACTCTTCCAGGATTTTAAATCTTATGTGCGTAATGAGCTGAACCAGGTGCCTGTGGCGGAACAACTGGCCATGATGGCGATCGAACACGTTTCCGAAAATGAAATCAGGGTGCTTTGTGTATCGACGGTGAACCATATCTACGGTAACAACCAGCGCGAGGTATTCCTGGATTATGCCAAGAAGAAGACCTTTATTCCCGACCTGCGCGTGATGGTACAACTGGACCCTACGGCCCGGAAGGAAATCGTGATCGAAAGACCGATGAATAAAATGGAAATCTTTGAGGAAATGGCCGGCAAGAACCCCGCCCTGCGGCAATTGCGCGAAAGTCTGAATCTGCAGGTGGAGTAG
PROTEIN sequence
Length: 633
MSEQYIVSARKYRPQTFDTVVGQQHITTTLKNAIRTQHLAHAYLFCGPRGVGKTTCARILARTINCENPTPDMEACGTCSTCLSFQDNTSFNVFELDAASNNSVDDIRSLTEQVRYAPQHGKYKIYIIDEVHMLSTAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRIQTEDIVGHLASICNKEQVVAENAGLHIIAQKSEGCMRDALSMMDRIAGFTNGQLTYAQTVEHLNILDADVYFKLGDVLLSKDVGGALLQLDNVLQRGFEGDVILNGFAEHFRNLLLSKDGRMARLLDVPEDHKRIYFEKAQIIPADYILSALSILNDAEMGFRTALNKRLHIELCLIRLCYVNDMLSPAASADADAKKKRLEPGNGLAGTAPAPTPVAPPPVVQPVATPVMNPVTPPPAPQPAPVMPPVQAQQPPAQPAYTPPPVMQPAAVVSEPAPPVYSNNTATVNNAASAIPDLARKPKLGRNFLQDIHTQIGQQVEDAGERMVLDQQNVEQLFQDFKSYVRNELNQVPVAEQLAMMAIEHVSENEIRVLCVSTVNHIYGNNQREVFLDYAKKKTFIPDLRVMVQLDPTARKEIVIERPMNKMEIFEEMAGKNPALRQLRESLNLQVE*