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berkeley_reactor_200306_planktonic_scaffold_69065_111

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 133738..134322

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Porphyromonadaceae RepID=G9S7M1_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 176.0
  • Bit_score: 152
  • Evalue 3.90e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 177.0
  • Bit_score: 151
  • Evalue 1.40e-34
Tax=CG_Bacteroid_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 179.0
  • Bit_score: 156
  • Evalue 2.90e-35

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Taxonomy

CG_Bacteroid_02 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCGGAATACACGGAACTGGATATAATTGAAGGATGCCGGCGGAATAACCGTACGCATCAGGAATATCTGTATAAGAAATATTACAGTTTATTCCTGAAGCTCTGTGCCCGTTACGCAAAGGATATGCACGATGCCGAGCAGCTCATGCAGGACGGTTTCCTGAAAATTTTCAACCATATTAACGACTATAGCGGCAAGGGATCGTTTGAGGGCTGGATGAGAAGAATCGTCGTAAACACCTGCCTGGACTATTTAAAAAGCAAATACCTAAAAAACGCCATGCAACTGCATTTCCCGAACGAAATAGGCGAAAGCGCCACGTTCAGCGTAGAAAACAGTGCCCTGGATAAAATTGCCATGAAGGATCTGCTGGGTATTATACAAACCCTGCCCCCCATGAGCAGAACGGTATTTAACCTTTTTGTGTTTGAAGGATATACCCATAAAGAAATAGGTACGCTGCTGGATATGAGCGAGGGAACCTCCCAATGGCATGTCAACAATGCCCGCAAAAACCTGCAGCAGAAAATAAAAGCGAATCAGTTTACAGAAATTAAGTGTTATGAGCAAAAACGAATTTGA
PROTEIN sequence
Length: 195
MAEYTELDIIEGCRRNNRTHQEYLYKKYYSLFLKLCARYAKDMHDAEQLMQDGFLKIFNHINDYSGKGSFEGWMRRIVVNTCLDYLKSKYLKNAMQLHFPNEIGESATFSVENSALDKIAMKDLLGIIQTLPPMSRTVFNLFVFEGYTHKEIGTLLDMSEGTSQWHVNNARKNLQQKIKANQFTEIKCYEQKRI*