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berkeley_reactor_200306_planktonic_scaffold_89056_22

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(50907..51974)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein AmpH, putative n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UCD3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 343.0
  • Bit_score: 254
  • Evalue 1.00e-64
Penicillin-binding protein AmpH, putative {ECO:0000313|EMBL:EAP90914.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 343.0
  • Bit_score: 254
  • Evalue 1.40e-64
beta-lactamase similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 366.0
  • Bit_score: 187
  • Evalue 4.30e-45

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Taxonomy

Oceanicaulis sp. HTCC2633 → Oceanicaulis → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGTCGCCTGTTTCCCGGCAACCGGCAAGACCAAGACTAGCGCCGATTCCGTAGCCAGGATCATTACCGAAGAAACGGCCCGGCTCATGCAAACGCCCGGATATCAAGCTGTTTCGGGCGTCATTTATATCAAGGGGAAAGCACTGCATTTCCATTATGGCAAACTGGGCAACGGGAAAAAGCCCGACAACAATACGATCTACGAAATAGGTTCGATTACCAAAACCTATACGGGCCTGTTGCTTTCCCAGGCGGTACAGGATCATAAGATCAGCCTGGACGAAGATGTACGGCATTACCTGGACGGCCCGTATCCCAACCTGGTCCTGGCCGGTGGCCGCCCCATCACCTTCCGGCATCTCATTACCCATACTTCGGGACTGCCGCCCCTGATGCACTGCAACGACGATCGCCAGCCCATCGCGGCACAAGCCGATTGTTATCTTCGTTTTAACCGGGAAGATTTCTTTACCGCCCTGAAAACCGTGCGCCTTGTCGATAGTTCGGGAGACCATTATCATTACTCGGGCGTAGGCATCCAGTTGATCGGTTATATACTGGAACAGCTGTACCACAAAAGCCATATGGAACTACTCCGGCAATATGTCTTTGCCCGTTCGGGCGAACGCCAGACGGTTTCAGTACTAAAGCAGGAAGGTACCCCCAACCGCTCCATAGGCACCAATAGCGAAGGCAAGCCCATGCCGCTGATCAACGGGCTTTATACCTACTCGGGCGGTATGAAATCCACGACGGCCTCCATGTTGCACTATATCAGGATGTACCTGGAAAGTACCGATCCTGTAGTGTTACAAGCTATGAACCGCCTGGCAGGCGATGCGCAATACGGACGGGCTTATGCCTGGAACACTTATGCCTATGACCAACCCATGAAAATGCTGTACCATAACGGCGGCACTTTCGGTCATTCTTCCTGGATAGCACTTTACCCCGAACAGAAGGTAGGTATCTTCATCGTCACGAATATAGTCACTGCAGATGCGCAGGGCCAGCTCAATGAGTTGTCCAACCGTATTATCGACCGGCTCCATATCATCGGCAATTAA
PROTEIN sequence
Length: 356
MVACFPATGKTKTSADSVARIITEETARLMQTPGYQAVSGVIYIKGKALHFHYGKLGNGKKPDNNTIYEIGSITKTYTGLLLSQAVQDHKISLDEDVRHYLDGPYPNLVLAGGRPITFRHLITHTSGLPPLMHCNDDRQPIAAQADCYLRFNREDFFTALKTVRLVDSSGDHYHYSGVGIQLIGYILEQLYHKSHMELLRQYVFARSGERQTVSVLKQEGTPNRSIGTNSEGKPMPLINGLYTYSGGMKSTTASMLHYIRMYLESTDPVVLQAMNRLAGDAQYGRAYAWNTYAYDQPMKMLYHNGGTFGHSSWIALYPEQKVGIFIVTNIVTADAQGQLNELSNRIIDRLHIIGN*