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berkeley_reactor_200306_planktonic_scaffold_89056_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(52135..52629)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator MarR family protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CSE5_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 164.0
  • Bit_score: 234
  • Evalue 5.00e-59
Transcriptional regulator SlyA {ECO:0000313|EMBL:CEJ71578.1}; Flags: Precursor;; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 162.0
  • Bit_score: 244
  • Evalue 6.80e-62
transcriptional regulator MarR family protein similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 161.0
  • Bit_score: 236
  • Evalue 4.90e-60

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Taxonomy

Chryseobacterium oranimense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 495
ATGCAATACGATCTTATCCGGGAGCTGGGATACAAAGCGCTCGACAGCAGGTTAAAGCGGATCAGCGACCGCATGTCGCACGATGTAAGACGCTTCTATAAAGAGCAGAACATAGACATAGAACCCCACTGGTACCTGGTATTTATGTTGTTGCAAAAGGAAGGCGAGCTTCCCATCACTGCCATTGCAGCGCCGCTGGGCTACACCCACCCTTCTGTTGCAGTTATGGTAAAGAAAATGGCGGATAAAGGCTACCTGCATATCCGGAAAGACCGTACAGACAAGCGGCAACAGCTCGTTTCCCTATCCGAAAAGGCGTTGAAGATGTTGCCACAATTGGAAGCGGTGTGGCGGAGCTGCGAAAAGGCGATCCTGAAAATGCTCAACAAAGACCTGGCCATTCTCCTATACCTCGACCAGATCGATGCAGCACTGGAAAAAAATTCCTTTCACGACCGGTTTCAACAGGAGTTCCTCAAAACGAAAAGTAAGTAA
PROTEIN sequence
Length: 165
MQYDLIRELGYKALDSRLKRISDRMSHDVRRFYKEQNIDIEPHWYLVFMLLQKEGELPITAIAAPLGYTHPSVAVMVKKMADKGYLHIRKDRTDKRQQLVSLSEKALKMLPQLEAVWRSCEKAILKMLNKDLAILLYLDQIDAALEKNSFHDRFQQEFLKTKSK*