ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_89056_35

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(65763..67715)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.3
  • Coverage: 662.0
  • Bit_score: 259
  • Evalue 1.10e-65
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQW6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 27.9
  • Coverage: 671.0
  • Bit_score: 236
  • Evalue 4.00e-59
putative signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 27.9
  • Coverage: 671.0
  • Bit_score: 236
  • Evalue 1.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flammeovirgaceae bacterium 311 → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1953
TTGTTTAATATTGTAGCAGACCGATTGCCCGTGCGGAGTTACCTGTTATTGATATGCCTTGTTTTTTATTGCCTCCAGCACCTGTGGGCACAGGAAGTTATATCAGACGGGCGCCAGCGCTACCGGCCCCTCTCCCCTGCCGATTCAACAGCCATCAACCTCCTGATCACGAAAGGAACCGCCCTGGTGAATGAACATACCGACAGCGCCATCGTACTTTTAAAAACGGCCGAAGCCCAAAGCAGGCGCCTGGGTTATGGCGATGGCACCGCCCTTGCCCTGATGGGATTGTCCAGCTGTTTCTCCGTCAGGAACGAAACCGCAACGGGCGACCAGTTGCTGGACAAGGCCTATCCATTTTGTTTGCGTTCGCAACAAAAAGACAAACTGCTGGTCCGGTGGTACCGTACCCGGTTTATCAGTTATAAGTACAGTGGGCGCACCGACTCCGCCATGGCAGCCGTGGGCAAGGTCATTCCCATTGTAGAACGGTTGAAGGATAGTGCTTATATCATCAATTCCTACAACCATATCGGCTCTATACTGATCGATAACCGGGATTATAAAAATGCCTATACCTATATCCGGAAGGCCCTTCAAATGAATACGCGCTTTAATAGCGACAAGCTCGTTTCCTGCCTGAATCTGGGTTATATCTATTCGGAGCGCAACGACCTGGACAGTATGTACCAGGTGGCATCGCTGGCGTACGAAGGTGCCCGCAAGCTGCAGACAACACGTTATGAACGTTCGGCATGCCTGCTGCTGAACAAATACTTCCTGGCAAAAGGACAGGACGCCAAGGCTGAAACATACGCCCGGCAAGCGATCGGGCTTATCGACGATCATGCTGCCGACAACGGCCTGTACGTATACCGGGTGTTATGCATGAACTATAAAAATTATGGAAAACCGAAACAGGCGCTGGTTTATGGCAACCAGGCCCTGAATTACCTGAGGCCAAGGCAGACCTTAAGAACCGACGTTAACCACCTGTACCTGTTGCTGGCAGAGCTGTACCACGCTACCGGCGACCAGACAAAGGCCTATGATATGCTGTTGCAGTATAACCGGCTTTCCGACAGCCTGCATACCCAGGAGCATGATAAGGCGACCGGCTATCTCGAAAAGCAATTCCGGCTTGCTGAAAAAGAAAAAGAGATCGCTTTAAAAGAGAATCAACTACTGGTAGAGACCGGCAAGGTAAAAAACCGTAATATCTGGATCGCCGTCGTATCCGTAAGCATCCTGGTATCGATAGGCATATCGCTGGGCCTGTACCGCAACTCCAGGAGAAAGATCTATATCCTGCGGCAGCAGCGTGAAATCGATAGCCTGCGCGCCATGATGGAGGGCGAAGAACGGGAACGTAACCGTATAGCGATCGAGCTGCATGACAATATAGGCGGCATGCTTTCGGCAGCCGCCTACAGCCTGGAATCGCTTAAAGACAGGCATTACAGCCCTGCGGAGCTGGAACTCTTCCGGAAAGTGGATAGCATTATCGATAGTGTACGCAATGAAGTACGCCGTACGGCCCATACCCTAATGCCCGATGTATTGTTGCGCCACAGTCTGCCGGAAGCGATCCGCCAGTATTGCCAGTTTATCGAGACCGATACGGGACTGATCATCGATATACAACAACATGGCAATTTTGAACAGCTGGACCAGCACATCCAACTGGCCCTGTACCGTATTGCCCAGGAGCTGATCCAGAACATCCTGAAACATGCAGGCGCCAGCCATGTTATGGTACAGGTACACCTCGGCAAAGACCTGGTAAGTCTTACCGTAGAAGACGATGGTATAGGCTTTAACCCGCTGACACAGACACAGGGCCGCGGTCTGCAACATATAGAACGGCGTTTAATGGCTATTAACGGGAAAATAGCCATCGATTCGGAACCAGGCAAAGGCAGTTCGCTCTACATCGAAATCGGCACTTCCTGA
PROTEIN sequence
Length: 651
LFNIVADRLPVRSYLLLICLVFYCLQHLWAQEVISDGRQRYRPLSPADSTAINLLITKGTALVNEHTDSAIVLLKTAEAQSRRLGYGDGTALALMGLSSCFSVRNETATGDQLLDKAYPFCLRSQQKDKLLVRWYRTRFISYKYSGRTDSAMAAVGKVIPIVERLKDSAYIINSYNHIGSILIDNRDYKNAYTYIRKALQMNTRFNSDKLVSCLNLGYIYSERNDLDSMYQVASLAYEGARKLQTTRYERSACLLLNKYFLAKGQDAKAETYARQAIGLIDDHAADNGLYVYRVLCMNYKNYGKPKQALVYGNQALNYLRPRQTLRTDVNHLYLLLAELYHATGDQTKAYDMLLQYNRLSDSLHTQEHDKATGYLEKQFRLAEKEKEIALKENQLLVETGKVKNRNIWIAVVSVSILVSIGISLGLYRNSRRKIYILRQQREIDSLRAMMEGEERERNRIAIELHDNIGGMLSAAAYSLESLKDRHYSPAELELFRKVDSIIDSVRNEVRRTAHTLMPDVLLRHSLPEAIRQYCQFIETDTGLIIDIQQHGNFEQLDQHIQLALYRIAQELIQNILKHAGASHVMVQVHLGKDLVSLTVEDDGIGFNPLTQTQGRGLQHIERRLMAINGKIAIDSEPGKGSSLYIEIGTS*