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berkeley_reactor_200306_planktonic_scaffold_89056

Search features with annotation key words

Displaying items 31-60 of 218 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_89056_31
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

61271..63145
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003780D1B
PKD domain-containing protein
PKD domain protein {ECO:0000313|EMBL:AEV32041.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
berkeley_reactor_200306_planktonic_scaffold_89056_32
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63235..63942)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F01DB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17547.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_89056_33
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64055..64852)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Streptococcus sanguinis SK115 RepID=F0IB78_STRSA
Uncharacterized protein {ECO:0000313|EMBL:KFF26529.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_89056_34
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(65064..65702)
DNA (639bp) protein (213aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9Z1_CHIPD
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU59228.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_89056_35
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(65763..67715)
DNA (1953bp) protein (651aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQW6_NIAKG
putative signal transduction histidine kinase
berkeley_reactor_200306_planktonic_scaffold_89056_36
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

67939..70359
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SD37_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KJS05046.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_89056_37
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

70381..72474
DNA (2094bp) protein (698aa)
Conserved repeat domain protein id=4221074 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
berkeley_reactor_200306_planktonic_scaffold_89056_38
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(72574..73686)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029ADF4D
Uncharacterized protein {ECO:0000313|EMBL:KFF11344.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
berkeley_reactor_200306_planktonic_scaffold_89056_39
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

73945..74517
DNA (573bp) protein (191aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0B8_PEDHD
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ACU04830.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
berkeley_reactor_200306_planktonic_scaffold_89056_40
unknown

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comp(74637..75074)
DNA (438bp) protein (146aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_89056_41
unknown

Not on your lists

comp(75125..75568)
DNA (444bp) protein (148aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_89056_42
unknown

Not on your lists

comp(75619..76059)
DNA (441bp) protein (147aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_89056_43
unknown

Not on your lists

comp(76116..76574)
DNA (459bp) protein (153aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_89056_44
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

77122..77904
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K648_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDN73622.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_89056_45
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

78612..79691
DNA (1080bp) protein (360aa)
ionic transporter y4hA n=1 Tax=Niabella aurantiaca RepID=UPI00037E9CE7
Ionic transporter y4hA {ECO:0000313|EMBL:KIC95752.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ionic transporter y4hA
berkeley_reactor_200306_planktonic_scaffold_89056_46
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

79869..81314
DNA (1446bp) protein (482aa)
Peptidase, S41 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3F5_9FLAO
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
berkeley_reactor_200306_planktonic_scaffold_89056_47
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81345..82799)
DNA (1455bp) protein (485aa)
transporter n=1 Tax=Pedobacter agri RepID=UPI00029ADE83
Transporter {ECO:0000313|EMBL:KEQ31358.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
outer membrane protein
berkeley_reactor_200306_planktonic_scaffold_89056_48
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82810..84171)
DNA (1362bp) protein (454aa)
biotin attachment protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037F9285
Biotin attachment protein {ECO:0000313|EMBL:KIA93418.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
secretion protein HlyD
berkeley_reactor_200306_planktonic_scaffold_89056_49
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(84164..85165)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLM1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60308.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_89056_50
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(85611..86729)
DNA (1119bp) protein (373aa)
Radical SAM domain protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K0Z8_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:ELR73132.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_89056_51
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(86901..87914)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DQA3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP96611.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_89056_52
unknown

Not on your lists

comp(87981..88142)
DNA (162bp) protein (54aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_89056_53
unknown

Not on your lists

comp(88459..88728)
DNA (270bp) protein (90aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_89056_54
unknown

Not on your lists

88895..89080
DNA (186bp) protein (62aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_89056_55
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

89100..89513
DNA (414bp) protein (138aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y265_9SPHI
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EHQ26722.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_89056_56
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89770..90834
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MSU8_9SPHI
ankyrin
Ankyrin {ECO:0000313|EMBL:AJH15127.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
berkeley_reactor_200306_planktonic_scaffold_89056_57
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(90848..91501)
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXV8_LEAB4
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADQ19055.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
berkeley_reactor_200306_planktonic_scaffold_89056_58
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(91519..93474)
DNA (1956bp) protein (652aa)
Signal transduction histidine kinase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRT2_SOLCM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFD07720.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
berkeley_reactor_200306_planktonic_scaffold_89056_59
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93674..95929
DNA (2256bp) protein (752aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJM8_FLUTR
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEA43918.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
berkeley_reactor_200306_planktonic_scaffold_89056_60
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

95945..99103
DNA (3159bp) protein (1053aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002FE7180
Conserved repeat domain protein {ECO:0000313|EMBL:EFM10789.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
hypothetical protein
Displaying items 31-60 of 218 in total

View Taxonomy