ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_89056_57

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(90848..91501)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXV8_LEAB4 similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 207.0
  • Bit_score: 151
  • Evalue 7.40e-34
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 207.0
  • Bit_score: 151
  • Evalue 2.10e-34
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADQ19055.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 207.0
  • Bit_score: 151
  • Evalue 1.00e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leadbetterella byssophila → Leadbetterella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 654
ATGGATAATAGCGTAAGGGTTACGGTCGCCTTACTGGACGATCACCCTGTACTGGTGAGGGGATTGAAAAACATGCTGGAAAGTGTTTCCTGGCTGCAGGTAACCGGTGCCTACAGTAAGGTAACCGATTGCCTTGCCGATTTTGAAAAGGGCATACGTCCGCAAATCCTGCTGATGGATGTATTTATGCCGGAAACAAACGGGGAAGAGCTGGCCGTTATCGTCAGGAAGCAATACCCGGATATTGCCCTGATCGTGTTTACGAACCTCGAGCAGCGGTATTATATCAACTCGCTGCTGGCAAAAGGCGTATCGGGTTATGTGATCAAAAGCAGTGCCGAAGATATCCTGATGGAAGCTATACGAACCGTGGCTTCCGGCGGTATTTATTTCGATCCGCTGATCGAAAGCCAGGCTACGGAGGCCGTTAAGATGAAGAAATCCGATGCGGCGGGCAAACTTGTTTTAACCCCCAGGGAAAAAGAGATCCTGAAGCTGCTGGCCGACAATTGCAGTAGCAGCGAAATTGCAGAACGGCTCTACATTTCAAAAAGAACGGTGGATTTTCACCGCGCCAATCTCCTGCTTAAATTTGATGTAAAGAATAGTATCGCCCTGGTAAAAAAGGCGATCGAATTGAGAGGCAGCCTGTAG
PROTEIN sequence
Length: 218
MDNSVRVTVALLDDHPVLVRGLKNMLESVSWLQVTGAYSKVTDCLADFEKGIRPQILLMDVFMPETNGEELAVIVRKQYPDIALIVFTNLEQRYYINSLLAKGVSGYVIKSSAEDILMEAIRTVASGGIYFDPLIESQATEAVKMKKSDAAGKLVLTPREKEILKLLADNCSSSEIAERLYISKRTVDFHRANLLLKFDVKNSIALVKKAIELRGSL*