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berkeley_reactor_200306_planktonic_scaffold_101710_96

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(107200..109047)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 615.0
  • Bit_score: 1076
  • Evalue 0.0
Phosphomethylpyrimidine synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH02_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 615.0
  • Bit_score: 1076
  • Evalue 0.0
hydroxymethylpyrimidine synthase similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 615.0
  • Bit_score: 1076
  • Evalue 0.0

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1848
ATGATAAAAAAGGACCAGGCCCCGGTACAGCAACAATTGTCGCTCGGCCCCATCAGCGGCTCCCGCAAGATCTATGTAGACGGCACATTATACCCGATCCGGGTAGCGATGCGCGAAATAGGCCTATCGCCTACAAAGCTTGCCAGTGGCGGCACAGAGATCAATGCACCTGTTACCGTATACGATACCAGCGGCGCTTATACCGACGACAACCTGAGCATCAACATCAGGCAGGGACTGCCAAGGCTGCGCGAGCAGTGGATCCTCGACCGCGGCGATGTAGCAGCACTGGAAGCTGTGAGCTCGCACTACGGGCGCGAACGACAGGACGACACCAGCCTGGACCACCTGCGCTTTGAACACATCCGCAAACCCTTAAAGGCAAAAGACGGCTGTAACGTAAGCCAGCTGCACTATGCAAAGAAAGGCATCATCACCGCCGAGATGGAATACATCGCCATACGGGAGAACCAGCGTATCGATCAATTGCAACACCAGGACCCAAGCGATAACACCAGCCTGGGCTTCCAGCATCCCGGCCATAGCTTTGGCGCCAATACGCCGGTAAAGTATATCACGCCTGAGTTTGTGCGTGACGAGATCGCCGCCGGCCGGGCTATTATCCCCAACAATATCAACCACCCGGAAAGCGAACCGATGATCATCGGTCGTAACTTCCTGGTGAAGATCAATGCCAATATCGGCAACAGCGCCGTAACCTCCAGCATCGAAGAAGAAGTGGAAAAAGCAGTATGGGCCTGCCGTTGGGGCGCCGATACCATTATGGATCTGTCGACCGGTAAAAACATTCACGAGACCCGCGAATGGATTATCCGTAACTCCCCCGTACCGATCGGCACCGTGCCCATCTACCAGGCGCTGGAAAAAGTAAATGGCAAGGCTGAAGACCTGACCTGGGAACTGTTTCGCGATACCCTGATTGAACAGGCCGAACAGGGCGTATCTTACTTCACCATTCATGCCGGTGTATTATTGCGTTATATACCCCTGACCGCTAAAAGGGTTACCGGTATTGTATCGCGCGGCGGCAGCATTATGGCCAAATGGTGCCTGGCGCATCATAAAGAAAACTTCCTCTATACCCATTTTGAAGAGATCTGCGCCATCATGAAAGCCTACGATGTCGCCTTCTCATTGGGCGACGGGCTGCGCCCGGGTTCTATTGCCGACGCCAACGATGCCGCACAGTTTGCCGAACTCGAAACCCTGGGCGAACTGACCAAAATAGCCTGGAAACATGATATACAGGTGATGATCGAAGGTCCCGGCCATGTGCCCATGCATATGATCAAGGAGAACATGGACAAACAACTGAAGGAATGCCACGAAGCGCCCTTCTATACCCTCGGACCGCTTACGACCGATATCGCTCCGGGTTACGATCATATAACCTCGGCCATCGGCGCAGCCATGATCGGCTGGTTCGGCACGGCTATGTTGTGTTATGTAACGCCCAAAGAGCACCTGGGCCTGCCGAACAGGAAAGATGTAAAGGATGGCGTAATCACTTATAAGCTCGCAGCCCATGCCGCCGACCTGGCCAAAGGCCATCCCGGTGCGCAATACAGGGATAATGCACTGAGCAAGGCCCGCTTCGAGTTCCGTTGGGAAGACCAGTTTAACCTCTCCCTCGACCCCGATACGGCCAGGGAATACCATGATGAAACCCTGCCCGCCGATGGCGCCAAAGTGGCCCACTTCTGTTCGATGTGCGGACCGAAATTCTGTTCGATGAAAATAACGCAGGAGATCCGAGATTCCGCGGCCAGCGGCCTGTTCGACAAGGCGGAAGAATTTAAAATGCAGGGCAGCCAGATCTATTCTTAA
PROTEIN sequence
Length: 616
MIKKDQAPVQQQLSLGPISGSRKIYVDGTLYPIRVAMREIGLSPTKLASGGTEINAPVTVYDTSGAYTDDNLSINIRQGLPRLREQWILDRGDVAALEAVSSHYGRERQDDTSLDHLRFEHIRKPLKAKDGCNVSQLHYAKKGIITAEMEYIAIRENQRIDQLQHQDPSDNTSLGFQHPGHSFGANTPVKYITPEFVRDEIAAGRAIIPNNINHPESEPMIIGRNFLVKINANIGNSAVTSSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLTWELFRDTLIEQAEQGVSYFTIHAGVLLRYIPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEEICAIMKAYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWKHDIQVMIEGPGHVPMHMIKENMDKQLKECHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNRKDVKDGVITYKLAAHAADLAKGHPGAQYRDNALSKARFEFRWEDQFNLSLDPDTAREYHDETLPADGAKVAHFCSMCGPKFCSMKITQEIRDSAASGLFDKAEEFKMQGSQIYS*