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berkeley_reactor_200306_planktonic_scaffold_101710_118

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 132848..137158

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCU3_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 1439.0
  • Bit_score: 1945
  • Evalue 0.0
RND-type efflux pump membrane protein {ECO:0000313|EMBL:GAO44523.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 1447.0
  • Bit_score: 1954
  • Evalue 0.0
CzcA family heavy metal efflux pump similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 1439.0
  • Bit_score: 1945
  • Evalue 0.0

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4311
ATGCTGAATAAAATCATTCACTTCAGCATCAGGAACAAACTGGTTATCGCGGTGTTTACCCTCGCGTTAATCGGTTGGGGTATCTGGAGCGCTTCCAGGTTGCCCATTGATGCTGTACCCGATATTACCAACAACCAGGTCCAGATCATTACGCTGAGTCCTACGCTGGCTGCCCAGGAAGTAGAACAGTTTGTAACCTACCCGGTAGAACAAAGCCTGGCCAACCTGCCCGGGTTGGAGGAAATGCGTTCTATCTCCCGGTTTGGCTTATCCGTAATTACCGTCGTATTCAACGACGATGTCGACATCTACTTCGCCCGGCAACTGATTGGCGAAAAGCTGAAAGAAGCGACCGATAAGATCCCCAAAGGAGCCGGTACCCCCGAGCTCGCGCCGGTAAGTACCGGTCTCGGCGAGATCTATCAATACGTATTACATCCTAAAAAAGGCGCCGAATCCAAATATACCGCCATGGACCTGCGTACCATGCAGGACTGGATCGTAGCGCGCCAGTTGTACGGTACGCCCGGTGTGGCCGAGGTCAACAGTTTCGGCGGTATGCTCAAGCAATACGAAGTAGCGTTGAATCCCGACCGGCTTAAGGCCATGAATGTATCCGTATCCGAAGTGTTTACCGCGCTGGAAAAGGGCAACCAGAATACCGGCGGCGCTTATATCGATAAGAAACCGAATGCCTATTTTATCCGTGGGGTAGGGTTGGTAACCTCTATCGAAGATATAAAGGCCATCGCCATCCGTAACAATGGCAATGGTGTACCTATCCTGATCAAAGATGTGGCTGAAGTAGGTTTTGGCAACGCCGTACGTTATGGCGCTCTTACCTATAACGGCGAAAAAGAAGCGGTAGGCGGCATCGTCATGATGCTGAAAGGCGCCAACAGCGCCGAAGTAGTAGGCCGGGTAAAAGCCCGCCTGGAAACCATCCGCAAGTCATTACCCAACGATGTGACCATCGAAGCCTTTGCCGACCGTACCGGCCTGGTGGACCGTGCAATCGGTACCGTAGAGCGCAACCTGCTGGAAGGCGCGCTGATCGTGATGTTTATCCTGGTGCTGTTTCTCGGTAACCTGCGGGCAGGCCTCATCGTGGCTTCGGCCATCCCTTTATCATTACTGTTTGCGCTGGGTTGTATGAAATTGTTTGGCGTAGGCGCCAACCTGATGAGCCTGGGCGCTATCGACTTCGGTTTGATCGTAGACGGCGCGGTTATTATCGTAGAAGCTACGCTGCATCACCTGGCGGCGGGTAAGCGTACCCACCGGCTCAGCCAGCAGGAGATGGACGAAGAGGTTTTTCTCTCTACCTCCAAAATCCGTAACAGCGCTGCCTTTGGCGAGTTTATTATCCTGATCGTATACCTGCCGGTATTATTCCTTGTAGGCATAGAGGGCAAAATGTTCCGACCCATGGCGCAAACCGTTGGCTTCGCTATTCTCGGCGCCTTTATCCTGTCGCTTACTTATATCCCTATGGTCAGTGCTTTGTTCCTGCCCAAAAATCCGCTGAACAAAGTTACCTGCTCCGACCGGATGATGACGGTATTGCAAAACCGCTTCCGGCCGCTCATCCGGGCTGCTATCCGGTTTCGCTACTGGGTAGTGGGAACGGCCGTAGCCCTGTTGCTGATCGCCGTATTCCTCTTCAGCCGTATCGGCGGTGAGTTTATTCCGCAGCTACAGGAAGGCGATTATGCCTTCCATTGTATCCTGCCGCAGGGTACTTCGCTTTCCCAGAGTATCGAAACGTCGATGCAGGCAGAACGTATCATCAAGTCGTTCCCCGAAGTAAAGGCTGTGGTCGGAAAAACAGGCAGTGCCGAGATTCCTACCGACCCGATGCCGCCCGAAGCTTCAGACCTGATCATTACGCTTAAACCCATGAAGGAGTGGACCACCACCCGTAACTATAACGAACTCGCAGAAAAAATGATGAAAAAGCTGGAAGTGATTCCCGGTGTATTTTTCGAAGCCTCCCAACCCATCCAGATGCGGTTTAACGAACTGATGACCGGTGTACGGCAGGATGTAGCCATCAAGATATTCGGAGAAAACGTAGAGCAGCTGGCAGACCTGGCGCCCAAAGTAGCCGCGGTAATACAGACCGTATCCGGCGCCACGGAACCGCAGGTAGAGCGTACTACAGGCCTGCCGCAGATCTCGGTGGTATACGACCGTATGCGCCTGGCCAACTATGGCATTACCGTAGAAGATGTGAATACCGTGCTGAGCACGGCTTTTGCCGGCCAGGCCGCCGGTGTGGTCTTCGAAAATGAACGCAAGTTCGACCTGGTGGTACGGCTCGACAGCGCCAGCAGGACCTCGATCGACGATGTCCGTAACCTGTTTATCACAACGGCAGGCGGCAACCAGATACCCCTGCAGCAGGTAGCCGATATTTCGTTTAAAGACGGTCCGGCCCAGATCAGCCGTGAAGGCGGTAAACGCCGTATCGTGATCGGGTTCAATATCAAAGGCCGCGATGTAGAAAGCGTGGTGAAAGAGATCCAGCAAAAACTGGATAAGGCGCGGTTACTGCCCGAAGGATATTATTACAGCTTCGGCGGCACCTTCGAAAACCTGCAGGAGGCTTCGGCACGGCTGGCGGTAGTGGTGCCCCTGGCCTTATTGCTGATCCTTTGCCTGTTGTATTTCACCTTTCATTCGATCAGCAACGCCTTGCTTATTTTTACCGCTATCCCTATGAGCGCCATCGGCGGCGTGTTTGCCCTGTTGCTCCGGGGCATGCCGTTCAGCATTTCGGCGGGCGTAGGTTTTATTGCCCTGTTTGGTGTGGCGGTATTGAATGGTATCGTACTCATCAGCACCTTTAACCAATTGAAGCAGGAGGGCATGGACGATGTGGTGCAACGGGTGCTCGAGGGTACGCGTATACGCCTGCGGCCGGTACTGATGACCGCCTGTGTGGCCGCGCTGGGCTTTATGCCCATGGCCCTCTCTACCGGTGCGGGTGCCGAAGTGCAGAAGCCCCTGGCCACGGTGGTTATCGGCGGTTTGCTGAGTGCTACGTTGCTTACACTTATCGTTTTGCCTTGCTTATACATTATCTTCTCGGGTGGTTTTAAACGGCCGGGCAAGGTTGCGGTTATGGTTCCCCTGCTTGTCCTGGGCTTCCTGTTGCCTGCCGGTGCTTCGGCCCAGCTGAGGTTGCCGGTAGAGGCCGTGGTCGATACTGCTTTAAACAATAACCTGCAGTATAAGATCAACGAATCGCAGATCAGGAAGGCGCAGCTGGAAACAAAAACGGCTACCGATCTGCCCAAGACGGGAGTTTTTGCAGAGAATGAAGATCTGCGGCCTTCCGATGCTAAAGGCATTCTGAAGATCGGGTTATCGCAAAGCATATCCTGGCCCGGCCTGTATGCCGCGCGCCGCCGCTATTTCGAAGAACAACAGCAATACTACCAACTCAATATCCCGGCGTTGAATGCCGTGGTAAAAAGAGATGTACGCTCGGCCTATTACCAGTTGTGGTACCTGCAGGATCGCTATGGCCTGTACGGGCAACTGGATAGTATTTACCGGCAGTTGTACGAGGCTGCGGCTTTAAAGGTAAAGACCGGGGAGAGTGCGGGGCTGGATAAAATAGCCGCGGGCGCCCGGCTAAAGGAAACGGAAGCCCTGCTGCAACAGATCGCACAGGAAATGCTGGTACAGCAACAACAGCTCATGATGCTGATGAACCGGGAACTACAGGTGCTCCCGCCGGATAATGCCCTGGAAAAAATAGCGGTGCGGCTGCCGGCAGCGGGCCTGCATCCCAGCCTGGCCCTGCAACAGCAAAACATCAACCTGGCACAGTCGAATATAAAGCTGCAGCAAAACAGCAATATGCCCGACTTCTCCGGCCGTTTCTTCTCACAGCGGCTTTATGGTCTCAACGATCCGTTTACGGGTTTCTCGGTTTCGGTGGCTTTTCCCCTGCTGGGTTTACATGCCAGCAGGAACAAGGTAAAGACGGCGCGGGCCGAAGCGCAGGTGCAGCAGGATCAGTTGGCCTACCAGGCCGGCCGTTTAAAAACCGAGCAGCAGCAGGAGCTGGCGGCTATGGAACAGGAGCGGGCCATGTTGCTCTTTTATGAACAAACAGGGTTACGGCAGGCCGAAGAGATCATTAATGCCGCCACACTCAGTTACCGCAGCGGCGAGATCAGTTTTGCCGAGCTGGGTCAGTACCTGGCCCAGGCCATCGATATCCGCCGCAACTATCTCGACAACCTGAACCGTTATAACCAGGCCGCTGTCCGGTTCCATTATCTCATTAACCAGTAA
PROTEIN sequence
Length: 1437
MLNKIIHFSIRNKLVIAVFTLALIGWGIWSASRLPIDAVPDITNNQVQIITLSPTLAAQEVEQFVTYPVEQSLANLPGLEEMRSISRFGLSVITVVFNDDVDIYFARQLIGEKLKEATDKIPKGAGTPELAPVSTGLGEIYQYVLHPKKGAESKYTAMDLRTMQDWIVARQLYGTPGVAEVNSFGGMLKQYEVALNPDRLKAMNVSVSEVFTALEKGNQNTGGAYIDKKPNAYFIRGVGLVTSIEDIKAIAIRNNGNGVPILIKDVAEVGFGNAVRYGALTYNGEKEAVGGIVMMLKGANSAEVVGRVKARLETIRKSLPNDVTIEAFADRTGLVDRAIGTVERNLLEGALIVMFILVLFLGNLRAGLIVASAIPLSLLFALGCMKLFGVGANLMSLGAIDFGLIVDGAVIIVEATLHHLAAGKRTHRLSQQEMDEEVFLSTSKIRNSAAFGEFIILIVYLPVLFLVGIEGKMFRPMAQTVGFAILGAFILSLTYIPMVSALFLPKNPLNKVTCSDRMMTVLQNRFRPLIRAAIRFRYWVVGTAVALLLIAVFLFSRIGGEFIPQLQEGDYAFHCILPQGTSLSQSIETSMQAERIIKSFPEVKAVVGKTGSAEIPTDPMPPEASDLIITLKPMKEWTTTRNYNELAEKMMKKLEVIPGVFFEASQPIQMRFNELMTGVRQDVAIKIFGENVEQLADLAPKVAAVIQTVSGATEPQVERTTGLPQISVVYDRMRLANYGITVEDVNTVLSTAFAGQAAGVVFENERKFDLVVRLDSASRTSIDDVRNLFITTAGGNQIPLQQVADISFKDGPAQISREGGKRRIVIGFNIKGRDVESVVKEIQQKLDKARLLPEGYYYSFGGTFENLQEASARLAVVVPLALLLILCLLYFTFHSISNALLIFTAIPMSAIGGVFALLLRGMPFSISAGVGFIALFGVAVLNGIVLISTFNQLKQEGMDDVVQRVLEGTRIRLRPVLMTACVAALGFMPMALSTGAGAEVQKPLATVVIGGLLSATLLTLIVLPCLYIIFSGGFKRPGKVAVMVPLLVLGFLLPAGASAQLRLPVEAVVDTALNNNLQYKINESQIRKAQLETKTATDLPKTGVFAENEDLRPSDAKGILKIGLSQSISWPGLYAARRRYFEEQQQYYQLNIPALNAVVKRDVRSAYYQLWYLQDRYGLYGQLDSIYRQLYEAAALKVKTGESAGLDKIAAGARLKETEALLQQIAQEMLVQQQQLMMLMNRELQVLPPDNALEKIAVRLPAAGLHPSLALQQQNINLAQSNIKLQQNSNMPDFSGRFFSQRLYGLNDPFTGFSVSVAFPLLGLHASRNKVKTARAEAQVQQDQLAYQAGRLKTEQQQELAAMEQERAMLLFYEQTGLRQAEEIINAATLSYRSGEISFAELGQYLAQAIDIRRNYLDNLNRYNQAAVRFHYLINQ*