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berkeley_reactor_200306_planktonic_scaffold_101710_127

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(147083..148495)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VR43_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 472.0
  • Bit_score: 724
  • Evalue 6.00e-206
Transcriptional regulator {ECO:0000313|EMBL:KIA91577.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 470.0
  • Bit_score: 757
  • Evalue 8.90e-216
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 470.0
  • Bit_score: 727
  • Evalue 1.50e-207

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1413
ATGAGCAAGGCGTTTTTATACCGGGAAATAGCGGCGGGCATTGCCGGCCAGATCAGGAATGGCATATTGAAAGCCGGCGACCGGCTGCCCTCGGTACGTACGCTGTGTATCGAATACGGCATCAGTATGAACACCGCCAAACGCGTATTCTGGGAGCTCGAAGCCCAATCGCTGGTAGACGCCAAACCGCAATCGGGCTTTTTTGTGCGCCCTTCGCTGCGGCATAAGCTGCCGCTGGCCGAGGTAAGCCGTCCTTCGCTGATCGCCAACGATAAAGAGCCCAATGAACTCATATCGAGGGTGTATGCCAATATCGGCCGCAATGACCTTACCCTCTTCTCGGTGGGCATTCCATCGGGCAACCTGCTGCCCCTTGCCAAACTGAAAAAAGAGATCCTGCAAGCCACCCGCGAGTTACAGCAAGGCGGGGCCGAGTACGAGCCACCCCAGGGCAATATAAAATTGCGACGTATGGTAGCCGCCCGATCGCTGGCCTGGGAAGGCGACCTGCACGAAGACGATATCGTAACGACGAGCGGCGGCATGAACGCGCTATCGCTTTGCCTGATGGCCCTGGGCAAACCCGGCGATACCATCGCGATCGAAAGTCCCTGTTACCCGGGCATTTTCCAGCTGGCGCTGAGCCTGGGACTTAAAGTGATCGAGCTCCCTACCCACCCCGTTACCGGTATTACCCTCGACGGACTAAAAAAGGTATTGCATAAGATCGACCTTTGCCTGCTGATCCCAAATTTCAATACCCCCCTGGGCAGTTGTATGCCCGACGAGCACAAACAGGAGATCGTGCGGCTCCTGGCCGGACGGAATATCCCGCTGATCGAAGACGATATCTATGGCGACCTGTTTTTCGGCACCCAGCGGCCGCGCTGCTGCAAGTCGTTCGATACGGAGGGCAATGTACTCTGGTGCAGTTCGGTGTCCAAAACACTGGCGCCCGGTTACCGCGTAGGCTGGGTGGCCCCGGGCAAACACAAGGAGAAACTGCTGCGGCTTAAACTCGTCCATGCCCTATCCTCCACCTCGGTGGTACACGAAGCCGTGGGCAACTTCCTGAAAACCGGCCGTTACGATCATCATATCCAGCACCTGCGCCGCACCCTGCAAAGCAATTACCAGCATTATACCGATGCCATAGCCGCCTATTTCCCGGAAGGCACGCGCACCAGCAGGCCCCAGGGCGGCCTGGCCCTATGGGTAGCCTTCGACAAAAAGATCGATACGACCGAGCTGTACGACCTGGCTATACGGAAGCATATCAGCATTGCACCCGGCCGCATGTTTACCCTGCAAAACCAGTTCGAAAACTGTATGCGGCTTTGTATCGGCCTGCCCTGGTCCGATGAATTGAAGTTTAAACTGAAACAGGTAGGCGACCTCGCCAAGATGCTTTAG
PROTEIN sequence
Length: 471
MSKAFLYREIAAGIAGQIRNGILKAGDRLPSVRTLCIEYGISMNTAKRVFWELEAQSLVDAKPQSGFFVRPSLRHKLPLAEVSRPSLIANDKEPNELISRVYANIGRNDLTLFSVGIPSGNLLPLAKLKKEILQATRELQQGGAEYEPPQGNIKLRRMVAARSLAWEGDLHEDDIVTTSGGMNALSLCLMALGKPGDTIAIESPCYPGIFQLALSLGLKVIELPTHPVTGITLDGLKKVLHKIDLCLLIPNFNTPLGSCMPDEHKQEIVRLLAGRNIPLIEDDIYGDLFFGTQRPRCCKSFDTEGNVLWCSSVSKTLAPGYRVGWVAPGKHKEKLLRLKLVHALSSTSVVHEAVGNFLKTGRYDHHIQHLRRTLQSNYQHYTDAIAAYFPEGTRTSRPQGGLALWVAFDKKIDTTELYDLAIRKHISIAPGRMFTLQNQFENCMRLCIGLPWSDELKFKLKQVGDLAKML*