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berkeley_reactor_200306_planktonic_scaffold_101710_129

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 149536..150141

Top 3 Functional Annotations

Value Algorithm Source
FMN-binding negative transcriptional regulator n=1 Tax=Galbibacter marinus RepID=K2PNF2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 199.0
  • Bit_score: 239
  • Evalue 1.90e-60
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77419.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 199.0
  • Bit_score: 246
  • Evalue 1.70e-62
FMN-binding negative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 199.0
  • Bit_score: 205
  • Evalue 1.10e-50

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 606
ATGTATATACCCCATGCCTTTAAGTTCGAAAGCCGGCCGGAGCAGGTCGCCTTTATGCAGCGTTATAGTTTTGCGGCCATGATAACCGCAGTAGAGGGTGTACCCCTGGCAACGCAATTGCCTTTTGTGGTAGGGGAGCGCGATGGCGCCGTGGTGCTGAGCGCTCATTTCGCCGCGGCCAATAAACAGGCGCAACATATAGAAGAACAGACCTCTTTGGTGATCTTCTCCGAACCCCATGCCTATATCTCCCCCTCGCATTACGACAAGCGGGAAAGCGTACCTACCTGGGATTATATTGCCGTACATGCCTATGGCAAGGCAAAAATAATCCGCGACCCGGAGGCCAAAAGCAAAGTCATGGAGCAGCTTATCGCTTATTATGAACCCGCTTATGACGCTACCTGGCAAACTTTACCGGAGCGATATAAAACAGGCATGTTGCAGGGCATCATAGCTTTCGAACTGGAAGTAACCGACCTGCAGGCGCAGCAAAAGCTAAGCCAGAACAAAACTGGGACCGAGCGTGAACGTATGATCACGCAACTCGAACAGGGTACTGCTACCGAAGCCGGCCTGGCGCCTTATATCCGGGCTACGCGCTGA
PROTEIN sequence
Length: 202
MYIPHAFKFESRPEQVAFMQRYSFAAMITAVEGVPLATQLPFVVGERDGAVVLSAHFAAANKQAQHIEEQTSLVIFSEPHAYISPSHYDKRESVPTWDYIAVHAYGKAKIIRDPEAKSKVMEQLIAYYEPAYDATWQTLPERYKTGMLQGIIAFELEVTDLQAQQKLSQNKTGTERERMITQLEQGTATEAGLAPYIRATR*