ggKbase home page
Advanced Search
Search Help

berkeley_reactor_200306_planktonic_scaffold_101710_144

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(161053..165642)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RHS repeat-associated core domain protein containing protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T839_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 1553.0
  • Bit_score: 1417
  • Evalue 0.0
RHS repeat-associated core domain protein containing protein {ECO:0000313|EMBL:EJL74242.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 1553.0
  • Bit_score: 1417
  • Evalue 0.0
Rhs family protein similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 1370.0
  • Bit_score: 751
  • Evalue 4.20e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4590
ATGAACAACATAAAAGCTCAGAAACCTAATATGTCGGCGGACCGTTCGTTAAGCGTATCGGCCAGCATTGTGCCGGCCAAAGCCGATGCCTCACCGGGTGGCGGCGGTAACGGCAGCGCCACACCGGCAACAACACCCGCAGCCGGAGGACCGGTAAAACGGATAAAGGCCCAAAAGCCCACCATGACCGGCAATGCGCGGCAACACGTCAGCAAACATTTCGATATTGTACTGGCCGTCGATTTTCACTGGACGACCATACCGATACCACCATCTTTCGGGATCATTCCCCTGCCCTTGCCCCACCCTTTTATCGGCATGGTGTTCGACCCTATGGATTATCTCCATTTCGATATCCCCATCCCTTCTTTCCTCCAGGAAAAAGTGGGCGCCAAGAGTATCCCGATGGGCGGTTCGATCTATGTGCACGGGCGGCATAAAGCCACGACCACAACCAGTGTTATGGGTGTATTACTCCCTTTCCGCCATATTTCCTCCATACCCGGTTTATACTTTATTGTGAATATACCCGGTTCGCCACATGAAGGCGAAGTATATTGGGGCTCAACCACCGTGCTGGCGCAGGGTTCGGAGCTCAGCGGCTCCGATCCGCAACAGGTGCTTACCTGCTGGTGCCCGCCGATGGGGCTCAAAATGCTGCCCACCATGCCCAATAAGATCAAGAAAAACCCCTTGGCTTATTTCGCATTCTACAACGATGTGTTGAGCATGTATGTACAGATCAATACCGGCGGACCTGTGCTCGTTGGCGGCGCTTTTGCCCCGCATAACTATACTGCCGCCGAAATGCTGATGCGTTTTGCCGGCATGGCCTTGGTCAAAGGTTTGGGCAAACTGGGCGGAGCGCTCAGCAGACGGGCGCTTACAGGGGTCAATAAGGTCTTGAAGCGGGCTTTCGGTACCTACAACCCCTTGTCCAAAAAGCTCTGTAAGTTTGGCTTCGAGCCCGTCAACTTCGTTACCGGCTCTATGTTTTTCGAATGGACCGATTTTGAACTGCCCGGCGGCACTACCCTGCAATGGAACAATACCTGGCGCAGCGACCGGCCATATTGCGGTATGCTCGGCAACGGTGTGTATAACAGTTACGACCTGTATATCCTTCCCGACGAAGCGGCGGGCATCGCAGGTTTTAATCACCCGGGCGAAAATATGGTGATGCCCCTGCCTTATATCCAACCGGGCACAGGGCCGCATTACGACCGTGCTCAAAAGATGGGCATCGAGCGCCCCGATCCCCATACCTGGATCCTGGTGATGGGCCAGGACGTCTACACGTATAAGCTACGGAAAGAAGCAGGTATCGGCGACATCTATCGTATTACGGAAATCCATTACCACAACGGCACGCGGCTTAACTTCCAATACCGCATGGATACCGGTTTGCTGGCGCTCATCACCGACGATGCGGGCCGTAGGCTGGAACTCGCACCTAATGCCGACAATACCAAGATTGAAGCGGTGTACTACCGCTATAAAAACATAAACGACCTGATGGTCCGTTATGTATACGACGAAGACAATAACCTGGTACAGGTCTTCGACCCGGCCGGCAAAAGCATCGACTTCGAATACGATACCCACAACCGCGTAGTCCGGAGAACCAACCGCAATCATAACTCCTATTTCTGGGAGTACGATACCGAAGGCCGCGTCATTCATACCGGCGGCGCCAACGGTTTCCAGGAAGGCCGGCTGGAATACTTTCCGGCATTGGGTTACAACAAGGTGCACTATCACAATGGTAAAACTGAGCTTTATTACTACGACGAAAACGACCTCATCTATAAAGAAGTGGATGCGCTGGGCGGTGAAACCTGGTATCAATATACCCGGTACAACGAACGTAAAATGATCGCCAGTCCAGAGGGCCGGATCATCGGGTACGAATACGATGAGCGGGGCAATATCATTGCCTTCCACAATTCCGAAGGCGAAACTTATACCTATACCTATAATGCGTTTAACCAGATAACCAGCCGGACAGAGCCTTCGGGGCTGACCGCAACATTTATCTACGATGAACATCAGTTATTAATAAGGCAGGTAGCCGAAGATGGTTTGGGTATCACTTACCATTATGATCCGGGCCTGGCGCAGCCTGCGTCGGCCATCGACGATACGGGACGCCAACTGTATTGGCAATACAATGCTTTAAAACAACTGGTCAGCGAAAAAGACAGCGAAGGAATACAGCGCAGCTGGTTATACGACGGCTATGGAAGGCTTGTGTTGTATAGTCCGGAGCCCATGAAGAGCACTACCTGGCAACGCGACCATATGGGTCGTGTGGTTCGCTACAAGGATATAGGGCAGGATGCCATTACCCTGGCTTATGACGCCTACGACCTGCCTGTCTATGCCGCCGACAGCAAAGAGGAATGGCTGCTGGAATATACGCCCATGGGCAACCTGAAGAAACAGGTACGCCGCAACCGCCAGCGGGGCAACGATATCCAGACGCTGCTGTTCAACTACGATGCTTACGACAACCTGCGGGCCATACGTAATGAAAAAGGCGAGTTGTATGCTTTTACCCGCGACGCCAACGACCGGGTTATAGAGGAAAAAGGATTTGACGGTACGATCAAAAGGTTCGTCCGCAACCGCGATGGACTGGTGATTAAAACCGCATTGCCCGGTGGCCGACAGGTATATCACAATTATGATCTGGCCGGGCGTCTTACCTATAGCAAGTACGACAGCGGTTACTGGGAAGCCTTTTACTACGACCGTTCCGGGTTGCTGGCCGGCGCTGAAACGCCCGACACCTCGCTTTCCTTTACCCGTAACTCTATGGGACTTGTCACCCGCGAAGAACAGGGCGAACACAGCATCGACTATGTGTATGATGCCATGGGTAACCTTCAGCAGTTAAAAAGCTCACTGGGCGCCGATATACAACAGGAGCACAATGCACTCGGTTTCCTTACCGGCATTAAAGCCACCCATGATAAAGCTACCTGGTCGGCGGCCATCGGTAAGGATATGCAGGGCCGCGAAGTGCGGCGCAGCCTGAGCGGCGGTATCGAGTCCAGCTTTGAATATGACCATGAAGGGCGGCCGGTGAGCCAGAAAATAAAAACGCATGGCATCACCGCCGCGCACAAACAATACAACTGGCATAACAATGATAAACTGGCATCCTGCCTTAACCTGGTCACCGGTGGCAAAGTGATGTATAACTACGACGCCTACGGTAATCTTTCCGGCGCTGCATACGATGGCAAGGAAGTACAGTATAAAAACCCCGATGAGACCGGCAGCCTGTTTAAAACACCTGACCGTTCCGACCGGGTTTATGGTAAAGGCGGAAGATTATTAAAAGATGACAACTGGTACTACCGTTACGATGAAGACGGCAACCTGGTGCATAAGAGTAAAAGAAATATCAACAACCTGCAGACAGCAACTGCTGCAGATCTGCCAGCCGGTAATAGCGACAAACAATGGGCCTGGGTCACTACCGATCATGTATGGGAAGATGGGGCACCACGCATAAAACCCTTAGCAGACAAGGATCCGGGCGTTCCTGAATGGCAGGCCGGCGACTGGACCTATACCTGGCAGGCCAATGGCATGCTGCAATCGGTACAAGACCCGCAAGGACAAATAACGCGTTTTGAATACGATGCCTTAGGTAGGCGTACCGCTAAAATACACGGCGATACTCTACACCGTTATCTCTGGGATGGTAATGTAATACTGCATGAATGGAGTTATGCCCTGGCCGACCGGCCCAGGCTGGGCATCAACGATAAGGGCATATTGGCCTACGACAGGCAGGAGCCTGTTAGCGATAACCTCATTACCTGGATCTACGATCAGCATAGCTTTACGCCTTGCGCCAAACTGGTAAACGGTAACATGTATTCTATCGTAAGCGATTACCTGGGCACGCCTACGCATGCCTTCGATGCTGATGGTCGTAAGGTATGGACCTGTGAATTGGATATTTACGGGAAAGTGCGTAAAATTACAGGCGATAAGGCCTTTATTCCTTTCCGCTACCAGGGCCAGTATGAAGACCTGGAAACCGGTTTGTATTATAACCGGTTCAGGTATTATGATCCGGAGGCGGGGAGTTATATCAGCCAGGATCCGATTGGGCTACTGGGAGGATTAAGACTATACACGTATGTGTATGATACCAATTACTGGTTAGATGTTTTCGGCCTTGAGATTATTCCTAATAAAGCCGATGGCACACTACGGGAAAAAATAGCTTACAACGAACTCAAAAAACAGCATCCTAATGCAACCATCTTGCAAGAACGTTATATAAGAGATAGTAAAGGAAACAGCGTTAAGGATCTTGACGGGTCCAGGAGACGATTAGATTTTGTCGTTGTAGAAGATGGCAAAGTTACCCGGGTAGTAGAAGTAACAAGCCCAACAGCAGATAAAACGTTGCAGATACAAAAAGAAGCTGACATAAGAAATAATGGAGGTACACATGTCCGGGAACCAGGCAAAAGAGGAACTAATGGCATGCATGATATTTCTAAGGTCGAAACAGAAAGAATGAATATTGATTTAGATGACCCCAAATTTGCAAAATATAAATAA
PROTEIN sequence
Length: 1530
MNNIKAQKPNMSADRSLSVSASIVPAKADASPGGGGNGSATPATTPAAGGPVKRIKAQKPTMTGNARQHVSKHFDIVLAVDFHWTTIPIPPSFGIIPLPLPHPFIGMVFDPMDYLHFDIPIPSFLQEKVGAKSIPMGGSIYVHGRHKATTTTSVMGVLLPFRHISSIPGLYFIVNIPGSPHEGEVYWGSTTVLAQGSELSGSDPQQVLTCWCPPMGLKMLPTMPNKIKKNPLAYFAFYNDVLSMYVQINTGGPVLVGGAFAPHNYTAAEMLMRFAGMALVKGLGKLGGALSRRALTGVNKVLKRAFGTYNPLSKKLCKFGFEPVNFVTGSMFFEWTDFELPGGTTLQWNNTWRSDRPYCGMLGNGVYNSYDLYILPDEAAGIAGFNHPGENMVMPLPYIQPGTGPHYDRAQKMGIERPDPHTWILVMGQDVYTYKLRKEAGIGDIYRITEIHYHNGTRLNFQYRMDTGLLALITDDAGRRLELAPNADNTKIEAVYYRYKNINDLMVRYVYDEDNNLVQVFDPAGKSIDFEYDTHNRVVRRTNRNHNSYFWEYDTEGRVIHTGGANGFQEGRLEYFPALGYNKVHYHNGKTELYYYDENDLIYKEVDALGGETWYQYTRYNERKMIASPEGRIIGYEYDERGNIIAFHNSEGETYTYTYNAFNQITSRTEPSGLTATFIYDEHQLLIRQVAEDGLGITYHYDPGLAQPASAIDDTGRQLYWQYNALKQLVSEKDSEGIQRSWLYDGYGRLVLYSPEPMKSTTWQRDHMGRVVRYKDIGQDAITLAYDAYDLPVYAADSKEEWLLEYTPMGNLKKQVRRNRQRGNDIQTLLFNYDAYDNLRAIRNEKGELYAFTRDANDRVIEEKGFDGTIKRFVRNRDGLVIKTALPGGRQVYHNYDLAGRLTYSKYDSGYWEAFYYDRSGLLAGAETPDTSLSFTRNSMGLVTREEQGEHSIDYVYDAMGNLQQLKSSLGADIQQEHNALGFLTGIKATHDKATWSAAIGKDMQGREVRRSLSGGIESSFEYDHEGRPVSQKIKTHGITAAHKQYNWHNNDKLASCLNLVTGGKVMYNYDAYGNLSGAAYDGKEVQYKNPDETGSLFKTPDRSDRVYGKGGRLLKDDNWYYRYDEDGNLVHKSKRNINNLQTATAADLPAGNSDKQWAWVTTDHVWEDGAPRIKPLADKDPGVPEWQAGDWTYTWQANGMLQSVQDPQGQITRFEYDALGRRTAKIHGDTLHRYLWDGNVILHEWSYALADRPRLGINDKGILAYDRQEPVSDNLITWIYDQHSFTPCAKLVNGNMYSIVSDYLGTPTHAFDADGRKVWTCELDIYGKVRKITGDKAFIPFRYQGQYEDLETGLYYNRFRYYDPEAGSYISQDPIGLLGGLRLYTYVYDTNYWLDVFGLEIIPNKADGTLREKIAYNELKKQHPNATILQERYIRDSKGNSVKDLDGSRRRLDFVVVEDGKVTRVVEVTSPTADKTLQIQKEADIRNNGGTHVREPGKRGTNGMHDISKVETERMNIDLDDPKFAKYK*