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berkeley_reactor_200306_planktonic_scaffold_101710_153

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(173137..173601)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00030E300B similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 154.0
  • Bit_score: 221
  • Evalue 4.10e-55
Two-component response regulator {ECO:0000313|EMBL:KGE12863.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 152.0
  • Bit_score: 219
  • Evalue 1.70e-54
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 154.0
  • Bit_score: 203
  • Evalue 3.30e-50

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 465
ATGGCCACCAAAGAGATCTCAGTTTTGTACGTTGATGATGAAGAAAATAACCTCCTTTCCTTCAAAGCTACTTTTCGTCTGAAGTACAATGTATTTACGGCGATCAGTGGTGAAAAAGCGCTGGAAATCATTGATAATAACGAAATACATGTTATTATCACCGACCAGCGTATGCCTGCGATGACCGGTGTAGAGTTCCTGGAAAAAGTGATTGATAAGAACAGCGACATAACCCGTATCCTGCTGACCGGGTTTGCCGATATGGGCGCCGTAGTCGATGCAATCAATAAAGGAAAAATATTTCATTATCTGACCAAACCCTGGGTAGAAGAGGAGCTGGACCTGACCATGGAGAAAGCCTACGAAATCTACCGCGAGAAGAAGAAAATTACACAGATGAACGATAAGCTGGCTTTATCCAATTCCCAGTTGGAATTCCTGCTCCGGCAAAAATTATTGTCGTAG
PROTEIN sequence
Length: 155
MATKEISVLYVDDEENNLLSFKATFRLKYNVFTAISGEKALEIIDNNEIHVIITDQRMPAMTGVEFLEKVIDKNSDITRILLTGFADMGAVVDAINKGKIFHYLTKPWVEEELDLTMEKAYEIYREKKKITQMNDKLALSNSQLEFLLRQKLLS*