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berkeley_reactor_200306_planktonic_scaffold_101710_155

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(175882..176697)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000307722F similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 254.0
  • Bit_score: 206
  • Evalue 1.90e-50
Uncharacterized protein {ECO:0000313|EMBL:KGE12860.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 249.0
  • Bit_score: 203
  • Evalue 3.80e-49
putative PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 210.0
  • Bit_score: 104
  • Evalue 2.80e-20

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 816
GTGCAGCCATCTGAAAAAGAACACCGAGTAACCTCCAAAACCAACGACCATATGCCAGAACCATTGTACAACATGGACTACCTGGAGCAGACTACCCGCCTGCTCAAAAACCTCAAACAAACCTCTTACCAACCTTTTGCAGCCTGCACCGGCGGTACGATAGCCGATATAGGCTGCGGCACCGGGGCCGACGCCCTGAACCTGCTTAAAATGCTGGAAGGCAAAGTAGCCGTACTGGGTATCGACCACGACGAACTGATGGTCGGTAAGGCACAAACCGATGCCGCCGGCCAGGAAGGCATCCGTTTCGAAACCGGCGACGCTACCCGGCTGAGCCTCGCAGATAACAGCCTGGCGGGCATCAGGGCCGAACGCCTGATCCAGCATATACCCGCTCCCGAACAGGCTTATGCAGAATTTAACCGCGTACTGCAACCCGGCGCACCGGTAGTGATCGTAGAAACCGACTGGAACAGTATTACTTTTTATAACGGCGATGCCGGCACTGCCCATGCGCTTAACCGCTACCTGACCCAGGAGAATGTAAACAACGGCCTCGCCGCTGCCAACGTGATCAAAAACCTGCAGGGCGCGGGCTTCCGCGATATCAACCTCGAAATATTCCCCTTCAGTTCCCGCTCCCTCGACCAGGTGGTAGCTATATTACGTATAGACTATGCACTGCAACAGATGGAAGCCCGGGGCCGTATAAGCACAGATGTATACGATAGTTTTCTGGCCGCCTTGCGCGATGCCGATCAAAATCGTTATTTTGCCTGCACAATCAATCTGGTTGTTGCCTCTGCGATAAAATAA
PROTEIN sequence
Length: 272
VQPSEKEHRVTSKTNDHMPEPLYNMDYLEQTTRLLKNLKQTSYQPFAACTGGTIADIGCGTGADALNLLKMLEGKVAVLGIDHDELMVGKAQTDAAGQEGIRFETGDATRLSLADNSLAGIRAERLIQHIPAPEQAYAEFNRVLQPGAPVVIVETDWNSITFYNGDAGTAHALNRYLTQENVNNGLAAANVIKNLQGAGFRDINLEIFPFSSRSLDQVVAILRIDYALQQMEARGRISTDVYDSFLAALRDADQNRYFACTINLVVASAIK*