ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_101710_165

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(186846..187610)

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|RuleBase:RU000517}; EC=5.3.1.1 {ECO:0000256|RuleBase:RU000517};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 252.0
  • Bit_score: 310
  • Evalue 2.00e-81
tpiA; triose-phosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 252.0
  • Bit_score: 305
  • Evalue 1.30e-80
Triosephosphate isomerase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NAE4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 252.0
  • Bit_score: 310
  • Evalue 1.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paraprevotella clara CAG:116 → Paraprevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 765
ATGTCCAGAAAAAAAATCGTTGCCGGTAACTGGAAAATGAACCTCAACCTGTTCGAGGGGAAACAATTAGTTGCCGATGTGCTGCAAAAAAGCCTGAGCCTGGCTGAGAACACCGAAGTAGTGATCGCTCCTCCTTTTACCCAGCTGGAGCTGGCCGCTACCCAACTGAAAGACACCCAGGGTTACCTGCTGGGCGCGCAAAACTGCCACCAGGAAGCCTCCGGCGCTTATACCGGCGAAGTATCTGCCGCTATGCTTAAAAGCGTTGGCGTTACTTATGTGATCCTGGGACACAGCGAACGCCGCCAGTATTTCGGCGAAGACGAAGCGCTGCTGGCCAAAAAAGTAAATGCAGCACTGGCCAACGATCTGAAAGTAATCTTCTGCGTAGGCGAACCCCTGGAAGTAAGGGATGCCAACGGTCAGAACGAACTGGTACACCAGCAGATCGTTGGCGGCCTGTTTCACCTCGATACCGCCCAGTTCAAAAATATCGTGATTGCTTACGAACCCGTATGGGCGATCGGCACCGGCCGTACCGCCAGCGCTGACCAGGCCCAGGAAATGCATGCCTATATCCGCTCGGTAGTTGCAGAAAAATATGGCGCCGAAACGGCTGATGATACCAGTATCCTGTACGGCGGCAGTTGCAAGCCTTCCAATGCAGCCGAACTGTTTGCCTGTCCCGATGTAGACGGCGGACTCATCGGCGGTGCGGCGCTCGTGGCAGCCGATTTTGCCGGCATTATCGAGGCTTCCAAATAA
PROTEIN sequence
Length: 255
MSRKKIVAGNWKMNLNLFEGKQLVADVLQKSLSLAENTEVVIAPPFTQLELAATQLKDTQGYLLGAQNCHQEASGAYTGEVSAAMLKSVGVTYVILGHSERRQYFGEDEALLAKKVNAALANDLKVIFCVGEPLEVRDANGQNELVHQQIVGGLFHLDTAQFKNIVIAYEPVWAIGTGRTASADQAQEMHAYIRSVVAEKYGAETADDTSILYGGSCKPSNAAELFACPDVDGGLIGGAALVAADFAGIIEASK*