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berkeley_reactor_200306_planktonic_scaffold_104042_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 32729..33316

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J1KMZ8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 195.0
  • Bit_score: 214
  • Evalue 8.30e-53
TetR family transcriptional regulator {ECO:0000313|EMBL:EJF99155.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 195.0
  • Bit_score: 214
  • Evalue 1.20e-52
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 195.0
  • Bit_score: 206
  • Evalue 6.40e-51

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Taxonomy

Flavobacterium sp. F52 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGGATAAAGCAGAAAAAACAAGACAGTTTATCATCGAACAGGCGGCGCCCGTATTCAATACCCGGGGTATTGCGGCCACAGCGATGAGCGATGTAATGGTCGCCACGGGACTTTCGAAAGGCAGTCTCTATGTACATTTTAAAGACAAAGAGGACCTGGCGCTTGCGGCGGTAAAACATAACCTGCAATTGCTGAACGATCGCGTGGCCCTGGCCCTGCAGCCGGGGGGGGACGCCGGGGCGCAGCTGTCGGCTTTCCTGGAGGTATTTGCGGATCCGCTGCAGCCGCCTGTAAAGGGGGGCTGCCCGATGCTCAACTTCGGCATGGAGGCCGACGACCTCTTTCCTGCCATCCGCGACGAAGTCGATAAATCCGTACGTATGGCGCAGCGCCGTATTGCCGGCATCATCAGGAAAGGGATTGCCGATGGGACCTTTGTTGCAGGCTGGCATGCCACGGAGGCCGCCACCAAAATGTTTGCCATGATAGAAGGCGGGATCATGATCAGCCGTATTGCCGGCCATAATGGAAAAATGAAACTCATTTTAAAAATGCTGAAACAGGAGATCGAGGACCACCAGGTCTGA
PROTEIN sequence
Length: 196
MDKAEKTRQFIIEQAAPVFNTRGIAATAMSDVMVATGLSKGSLYVHFKDKEDLALAAVKHNLQLLNDRVALALQPGGDAGAQLSAFLEVFADPLQPPVKGGCPMLNFGMEADDLFPAIRDEVDKSVRMAQRRIAGIIRKGIADGTFVAGWHATEAATKMFAMIEGGIMISRIAGHNGKMKLILKMLKQEIEDHQV*