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berkeley_reactor_200306_planktonic_scaffold_104042_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 33381..34229

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034B6343 similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 279.0
  • Bit_score: 340
  • Evalue 8.60e-91
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77436.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 281.0
  • Bit_score: 364
  • Evalue 1.00e-97
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 279.0
  • Bit_score: 337
  • Evalue 2.00e-90

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 849
ATGAAACAACAAAAAGTATGGCTTGTTACCGGCGCTTCCCGGGGATTTGGCAAAGCAATCGTAGAAGCGGCGCTGCAAGCCGGCGACCGGGTAGTGGCCACCGTACGCAGTAATGCGGACGACCTGAAAGAACAATTGGGTCATGCCGGTCAATTGCTGGTCGTTACCCTGGATGTAACACAGGAGGACCAGGTGCGGCAGGGTGTTGCCAATGCAGTAGCGCATTTTGGCCGTATCGATGTATTGGTCAATAATGCAGGGTTCGGTTTGCTTGGGGCCACCGAAGAGATTACCGATGCAGAGGCCCGCTACCAGTTCGATACCAATGTGTTTGGCCTGCTGAACGTTACCCGGGCCGTATTGCCGGTAATGCGGGCGCAGCAACAGGGTCATATTATCAATATATCTTCCCTGTTCGGTTATGGCGCCACGGTTCCCGGGCTTGGCCTGTATGGCGCTACCAAGTATGCGGTAGAAGGTATTTCTGAAGGATTGGCATTGGAACTTGAACCCCTCGGTATCCGGGTTACGGCTGTAGCGCCGGGCCTGTTCAGCACCGACTTTGTAACGGCAGATTCCTTCCGTTTTTCGGCGACAGTGCTCGATGCTTACCAGGCTACGGTTGGTAAGACCCGGGGTGTTGTTCCCGGTTTGCATGGCCATCAACCCGGCGATCCGCTCAAACTTGCGGCTGTACTGGTCCGCCTGGCCCATAGCGACCAGGCACCTTTGCACCTGCCGGTTGGAACCGATGCCTGGAGCCTTTTGCAGGCCAAGACGGCTGCTATTGTCGAAGAGGCAAGGACCTGGGAGCCGGTAATTACCGCTACGGATCATATAAGGGCATAA
PROTEIN sequence
Length: 283
MKQQKVWLVTGASRGFGKAIVEAALQAGDRVVATVRSNADDLKEQLGHAGQLLVVTLDVTQEDQVRQGVANAVAHFGRIDVLVNNAGFGLLGATEEITDAEARYQFDTNVFGLLNVTRAVLPVMRAQQQGHIINISSLFGYGATVPGLGLYGATKYAVEGISEGLALELEPLGIRVTAVAPGLFSTDFVTADSFRFSATVLDAYQATVGKTRGVVPGLHGHQPGDPLKLAAVLVRLAHSDQAPLHLPVGTDAWSLLQAKTAAIVEEARTWEPVITATDHIRA*