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berkeley_reactor_200306_planktonic_scaffold_104042_29

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 34431..35153

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 240.0
  • Bit_score: 361
  • Evalue 1.50e-97
Pseudouridylate synthase n=1 Tax=Neisseria mucosa ATCC 25996 RepID=D2ZZ08_NEIMU similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 240.0
  • Bit_score: 369
  • Evalue 1.50e-99
Pseudouridylate synthase {ECO:0000313|EMBL:EFC87652.1}; TaxID=546266 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria mucosa ATCC 25996.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 240.0
  • Bit_score: 369
  • Evalue 2.10e-99

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Taxonomy

Neisseria mucosa → Neisseria → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGCGCTTGGCTAAACGGATGGCTCATCTCGGGTTTTGCTCGAGGAGGGAGGCGGATGATTATATTTTGAAGGGCTGGGTAAAGGTAAACGGGCAGGTGACGCGGGAAAAAGGCATGCAGGTAACAGAAAGCGATCAGATAACCCTGAACAACCAGGCACAACAGCAGCAATCCAACCGGGTAACGATACTGTTGAACAAACCCGTGGGTTATGTAAGCGCGCAACCTGAAAAGGGGTATAAAGCCGCTATGGAATTGATTACGGCTGCGAACCAATGGTCGGAAGATAAAAGTAATATACGGTTCCGGGAACAACACCGCTATGGACTGGCGCCTGCGGGCCGGCTGGATATCGATTCGGTGGGCCTATTGGTACTGACGCAAGATGGCCGTGTGGCCAAACAGCTGATCGGCGAGACCAGCAGCACCGAAAAAGAATACCTGGTAAGGGTTACAGGCCGGCTGAGTGAAAACGGGCTGAAACTGTTGAACCATGGCCTGAGCCTGGATGGACAAAAATTATTACCGGCAAAGGTGAGCTGGCAGAACGAAGACCAGCTGCGGTTTATCCTGAAACAGGGCAAGAAACGCCAGATCAGGCGCATGTGCGAGCTGGTAGGTCTGCACGTAGTGGGTCTGAAGCGAATCAGGATGGGCAAGGTACAATTGGGACAACTACCGCAGGGAAAATGGCGGTATTTACGCGATAACGAAACGTTTTAA
PROTEIN sequence
Length: 241
MRLAKRMAHLGFCSRREADDYILKGWVKVNGQVTREKGMQVTESDQITLNNQAQQQQSNRVTILLNKPVGYVSAQPEKGYKAAMELITAANQWSEDKSNIRFREQHRYGLAPAGRLDIDSVGLLVLTQDGRVAKQLIGETSSTEKEYLVRVTGRLSENGLKLLNHGLSLDGQKLLPAKVSWQNEDQLRFILKQGKKRQIRRMCELVGLHVVGLKRIRMGKVQLGQLPQGKWRYLRDNETF*