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berkeley_reactor_200306_planktonic_scaffold_123701_144

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(166710..167252)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4674C similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 178.0
  • Bit_score: 203
  • Evalue 1.40e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 177.0
  • Bit_score: 216
  • Evalue 4.40e-54
Uncharacterized protein {ECO:0000313|EMBL:AHJ96680.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 177.0
  • Bit_score: 216
  • Evalue 2.20e-53

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Taxonomy

Hymenobacter swuensis → Hymenobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGAACAGAAAACAGAGCATAGCAGAGAGTGCCTTGGCCCTGTTTGCCAAAAGAGGCTACGAAAATACTTCCACACAACTTATTGCCAAAGAGGCCGGCGTATCCGAAGCCCTCATCTTTAAACATTTCGGCAACAAGGAAAAGCTCCTTACTTTCATTATCAAAGAAGGGTATAAACGTATTGTAGAAAACAACCGGGGTACCTTCCAGGATAAAGACCCGCTTGCATTCATCAATACCGTAATCGAATTGCCTTACAAACTGGTATGGGAAGAGCCCCAGTTCTGGGAGCTGCAGTACCGCCTGCTCGACCTGGAAATATCGCTCAAACAACACGAACGGTTTATGCAACCGCTGCATGCCATGCTGCTAAAGGCTTTCAAGGAACTGGGATACGAACAGCCGGAGAAAGAAACCGAACTGATCCTGATTTTCGTAGAGGCCTTCTGGAAATACCTGATCGCGCACCGCGAAGACAATAAGTCGAAATATGTAGACCTGCAGAATTTTTTCAAGCATAAATATGCCGACCAGCGGAGCTAA
PROTEIN sequence
Length: 181
MNRKQSIAESALALFAKRGYENTSTQLIAKEAGVSEALIFKHFGNKEKLLTFIIKEGYKRIVENNRGTFQDKDPLAFINTVIELPYKLVWEEPQFWELQYRLLDLEISLKQHERFMQPLHAMLLKAFKELGYEQPEKETELILIFVEAFWKYLIAHREDNKSKYVDLQNFFKHKYADQRS*