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berkeley_reactor_200306_planktonic_scaffold_164454_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(1098..1529)

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTW5_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 143.0
  • Bit_score: 205
  • Evalue 2.80e-50
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 144.0
  • Bit_score: 218
  • Evalue 3.50e-54
large conductance mechanosensitive channel protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 143.0
  • Bit_score: 205
  • Evalue 8.00e-51

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 432
ATGGGATTTCTTAAAGAGTTTAAAGAGTTTGCAATCAAGGGTAATGTTATGGATCTGGCCGTCGGTGTGATTATTGGCGCCGCTTTTGGCAAGATCATCGACAGTATCGTAAAAGACCTGGTTATGCCCCTGGTTTCGGCCGTTATCGGCCAGCCCGACTTCAGCAATCTTTATGTCGTCCTGAAGGGAGATGTACCGCCGGGTACCGCTCTTGTTGAAGCCCAGAAGATTAAGGATACCGCGATCTTTGCCTATGGCAATTTTATAACCGTAGCGATCAATTTCCTGCTGCTGGCTTTCGTTATTTTCATCATGGTAAAAGCCATCAATTCCCTGAAACGTAAAGAAGAGGCCGTTGCACCACCCAAAGCGCCCTCCTCTACCGAGGTTTTACTTACTGAAATCCGTGATGAGTTGAAAAAGAAAAACTAA
PROTEIN sequence
Length: 144
MGFLKEFKEFAIKGNVMDLAVGVIIGAAFGKIIDSIVKDLVMPLVSAVIGQPDFSNLYVVLKGDVPPGTALVEAQKIKDTAIFAYGNFITVAINFLLLAFVIFIMVKAINSLKRKEEAVAPPKAPSSTEVLLTEIRDELKKKN*