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berkeley_reactor_200306_planktonic_scaffold_164454_58

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(59857..61281)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XVJ3_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 470.0
  • Bit_score: 678
  • Evalue 2.90e-192
Multidrug transporter MatE {ECO:0000313|EMBL:ETZ22871.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 474.0
  • Bit_score: 708
  • Evalue 6.30e-201
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 470.0
  • Bit_score: 678
  • Evalue 8.20e-193

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1425
ATGTCCCATCCGACTAACGGTGCACCCGAAGCATCGAACTATTTTACGTTGCTCAAACAAGCCCTGCGTGGCGAAGAAATGGATTATACCCAGGGCAGTATCCGCAAAGCGGTGATCATGCTGGCCATACCCATGATGCTTGAAATGATCATGGAGTCCGTATTCGCCCTGGTCGACCTGTACTTCGTAGGCCACCTCGAAGACAGCAGCCATGCCATCCAGACCGTAGGCCTTACCGAATCCGTACTCACCATTATGTACTCCATTGCCATAGGCATGAGTATGGCCGCCACGGCAGTGGTAGCGCGGCGTATTGGTGAGAAGAACCCTGAAAAGGCCGCCCAGGCTGGCGTTCAGGCCATTATCGTAGCCTCGGCCATAACGATCCTGCTTAGCCTGGCAGGTCTCTACTATGCCGCCGACATTTTAAGTATTATGGGCGCCTCCCCCGAAACGGTAACTAAGGGCACGCCCTTTATCCGCATTACGATGGGCGGTAGTATTGCCGTCATGTTATTGTTCCTGATCAACGGTATTTTCCGGGGTGCGGGTAATGCCGCGATCGCTATGAAAAGCCTGTGGCTGGCTAATATCTGTAATATCGTACTCTGCCCGCTGCTGATCAACGGACTGGGCCCTATACCAGCCTTCGGGCTTACCGGCGCCGCTATGGCCACCACCATAGGCAGGGCCATGGGCGTGGCCTACCAGGCCTACCACCTGTTTTATGGCAAACACCAGTTAAAGATCCGCATCAGTCATTTCAAACCCGATTTCCCGGTCATTAAATCGCTGGTGGGCATTGCCACACCCGGCATCTTCCAGTTTGTGATCGCTTCCTGCAGCTGGGTCTTTTTAGCGCAGCTGGTGGCCACTACCGGTGGCGATAACGGTTCGGCCGGTTACCAGACGGCTTTACGCCTGATGATGTTCTTTATGCTACCAGCCTGGGGTATGAGCAATGCAGCCTCTACCCTGGTAGGACAAAACCTGGGCGCGCAACGCATCGACCGGGCCGAGGAATCAGTAATGAAGACCGTGCGGTACAATGTCCTGTTTATGCTTTTCGTAACCGTACTGTTCTTCTTCTTTGGCAACTGGCTGGTATCGTTCTTTACCCAGGACGAGGCCATCAAGGCTGTAGGCCGCCAGGCGCTGCGCATTATGAGTACCGGTTATATCTTTTATGGTATCGGCATGGTGATGATCAATACCTTTAACGGCGCCGGCGATACCTGGACCCCAACCTGGGTCAACCTTTGCGGCTTCTGGCTTTTCCAGGTGCCCCTGGCCTGGTTCCTGGCCAAACATTTAAGTATGGGCCCCGAAGGCGTGTTTATCGCGATACCGGTGGCCGAAACAGCGATCAGTATCGCAGCGTTTATCCTGTTTAAAAAGGGCCGCTGGAAAAAAACGAAAGTGTAA
PROTEIN sequence
Length: 475
MSHPTNGAPEASNYFTLLKQALRGEEMDYTQGSIRKAVIMLAIPMMLEMIMESVFALVDLYFVGHLEDSSHAIQTVGLTESVLTIMYSIAIGMSMAATAVVARRIGEKNPEKAAQAGVQAIIVASAITILLSLAGLYYAADILSIMGASPETVTKGTPFIRITMGGSIAVMLLFLINGIFRGAGNAAIAMKSLWLANICNIVLCPLLINGLGPIPAFGLTGAAMATTIGRAMGVAYQAYHLFYGKHQLKIRISHFKPDFPVIKSLVGIATPGIFQFVIASCSWVFLAQLVATTGGDNGSAGYQTALRLMMFFMLPAWGMSNAASTLVGQNLGAQRIDRAEESVMKTVRYNVLFMLFVTVLFFFFGNWLVSFFTQDEAIKAVGRQALRIMSTGYIFYGIGMVMINTFNGAGDTWTPTWVNLCGFWLFQVPLAWFLAKHLSMGPEGVFIAIPVAETAISIAAFILFKKGRWKKTKV*