ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_164454_63

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 66096..66956

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Niabella soli DSM 19437 RepID=H1NKW8_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 267.0
  • Bit_score: 339
  • Evalue 3.30e-90
mechanosensitive ion channel protein similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 248.0
  • Bit_score: 311
  • Evalue 1.60e-82
Mechanosensitive ion channel protein {ECO:0000313|EMBL:AHF14385.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 248.0
  • Bit_score: 311
  • Evalue 7.90e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 861
ATGGTCTTTTTACAAATCAATGAAACTTTAAATGCGGGTACCGCAGCCCTGGATACCGGCGGGGTATGGCTCAACAAGATCAAAGCCATGGCTATCGAATATGCGCCAAAGCTGATCGGCGCCATCCTGTTGTATATTATCGGGTCCTGGATAATCGGTAAGATCAATGCCTTGTTGCGCAGGGTACTTACCGGGCGCAACTTCGATGCTTCGTTGCAGAAGTTCCTGTTGTCGGTGGTCCGGGTTATGTTTACGCTGTTGCTGTTCCTGGCCATCGCCGGTATGATTGGTGTCGACATTACCGGTTTCGCGGCCTTACTGGCGGGGGCGGGTCTGGCAATAGGCGCTGCGCTCAACGGTTCGCTGGGCAACCTGGCCGGTGGCGTTATGATTATGGTATTCAAACCCTTTAAGGTAAACGATATGATCGAGGCCCAGGGTATGGTCGGTATCGTACAGGAGATCGGTATCTTCAATACCGTTATCCTTTCGCCGGAAAACAAGACCATTATCCTGCCCAACGGCGCTTTGTCTACGGGGGTAATCACCAACTATACTACGCATGGTAACCTGCGGGTGGATCTGACGATTGCTATTGCGCTCGATGTGGATATCGATAAGGCCCGCAGCGTGGCCATCAATGCCATGAAGGCGCATCCTAAAGTGCTGCGCACGCCGGCTCCCGAGGTGAGTGTGTTAAAAGTAGCCGATGGCATGACCACCCTGGCGATCCGCCCCTATACCCTGCAGGCCGATTACTGGGACGTATACTTTGGCGTGCAGGAACTCGTGAAAAAAGCATTCGACGGTCACCAGATTGCAGGCCCCATACCTACGCGGGTACTGATCAATAAAGTTTGA
PROTEIN sequence
Length: 287
MVFLQINETLNAGTAALDTGGVWLNKIKAMAIEYAPKLIGAILLYIIGSWIIGKINALLRRVLTGRNFDASLQKFLLSVVRVMFTLLLFLAIAGMIGVDITGFAALLAGAGLAIGAALNGSLGNLAGGVMIMVFKPFKVNDMIEAQGMVGIVQEIGIFNTVILSPENKTIILPNGALSTGVITNYTTHGNLRVDLTIAIALDVDIDKARSVAINAMKAHPKVLRTPAPEVSVLKVADGMTTLAIRPYTLQADYWDVYFGVQELVKKAFDGHQIAGPIPTRVLINKV*