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berkeley_reactor_200306_planktonic_scaffold_164454_73

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(74082..75398)

Top 3 Functional Annotations

Value Algorithm Source
Metabolite/H+ symporter, major facilitator superfamily (MFS) n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSM4_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 426.0
  • Bit_score: 693
  • Evalue 1.40e-196
Contig54, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76821.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 425.0
  • Bit_score: 699
  • Evalue 2.70e-198
metabolite/H+ symporter, major facilitator superfamily (MFS) similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 426.0
  • Bit_score: 693
  • Evalue 3.90e-197

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1317
ATGACTCAAGAAAAAGGCACAACCGCAACTACGGAAAAGATATCGAAAAGCACACTGAAAGCCATTATTGGCGGCTCGGTAGGCAACCTGGTAGAATGGTATGACTGGTATGCCTACTCTGCCTTCGCCTTGTATTTCTCCGGGTCTTTCTTTCCCGCAGGCAATCCTACGGCCCAACTGCTGAACACGGCCGGCATATTCGCACTGGGCTTCCTGATGCGGCCGATAGGCGGCTGGGTATTCGGCCGTATAGCCGATAAGATCGGGCGCAAGCAAAGCATGACGCTGTCTGTATTACTGATGTCGCTGGGCTCGCTGCTGATTGCCTTTACCCCAACCTATCAAAGTATAGGTCTGCTGGCGCCGGTATTGCTCCTGCTCGCCCGCCTGTTGCAGGGTCTTAGTGTAGGTGGCGAGTACGGCGTTTCTGCAACCTACCTCAGCGAGATGGCCAGTAAAAACAGGCGGGGCTTCTATTCCAGCTTCCAGTATGTAACGCTTATCGGCGGACAGCTGATCGCGCTGGGTATCCAGCTGATCCTGCAAAAGCTATTGCTCAGCGAAGCGCAATTACAGGCCTGGGGCTGGCGTATCCCCTTTGTGATCGGCGCCCTGCTATCGATCGTAGCGCTCTACCTTCGTAAAAACCTGCAGGAGACGCATGCTTTTGAAACTACAAAAAAGGAAGCCGAAAAAAACAAGGGTACGATCAAGGCGCTGCTGCAGCACCCCCGTGCGGTGATGACGGTGATTGGTCTGACCCTGGGCGGTACGCTGGCCTTTTATACTTATACCACGTATATGCAGAAGTTCCTGGTCAATACCGTACACCTGACCAAAGGGGAGTCGACGCTTATTTCATTTGTAAGCCTGCTGATCTTTGCCTTGCTGCAACCGGCTTTCGGGGCCTTATCCGATCGTATAGGCCGCCGGCCGCTGCTGATTGGTTTCGGGGTATTAGGCACCTTGTGCACCATTCCCCTGCTTACCTTCCTGAGTCATACCGAAAGTGCCTGGGTCGCCTTCTTCCTGCTCCTCTGTGCGCTTGTTATCGTAAGCGGGTATACCAGCATCAATGCCGTAGTAAAAGCGGAGCTGTTCCCGGCCGAGATCCGCGCCCTGGGCGTGGGCCTGCCCTATGCCTTAACCGTAGCCATTTTCGGCGGTTCGGCCGAGTATATTGCCTTATGGCTGAAAGACTCGGGGCACGAGTCGTTGTTCTACTGGTATATTACCGGTTGTATCTTTTGCTCCCTGCTGGTTTATGTATTTATGAAAGATACCAAAACGACATCGAAACTGAACGAGGATCGGTAG
PROTEIN sequence
Length: 439
MTQEKGTTATTEKISKSTLKAIIGGSVGNLVEWYDWYAYSAFALYFSGSFFPAGNPTAQLLNTAGIFALGFLMRPIGGWVFGRIADKIGRKQSMTLSVLLMSLGSLLIAFTPTYQSIGLLAPVLLLLARLLQGLSVGGEYGVSATYLSEMASKNRRGFYSSFQYVTLIGGQLIALGIQLILQKLLLSEAQLQAWGWRIPFVIGALLSIVALYLRKNLQETHAFETTKKEAEKNKGTIKALLQHPRAVMTVIGLTLGGTLAFYTYTTYMQKFLVNTVHLTKGESTLISFVSLLIFALLQPAFGALSDRIGRRPLLIGFGVLGTLCTIPLLTFLSHTESAWVAFFLLLCALVIVSGYTSINAVVKAELFPAEIRALGVGLPYALTVAIFGGSAEYIALWLKDSGHESLFYWYITGCIFCSLLVYVFMKDTKTTSKLNEDR*