ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_164454_75

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(76118..76918)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A3FD8 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 260.0
  • Bit_score: 360
  • Evalue 9.80e-97
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 256.0
  • Bit_score: 360
  • Evalue 2.80e-97
AraC family transcriptional regulator {ECO:0000313|EMBL:AKD55781.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 256.0
  • Bit_score: 360
  • Evalue 1.40e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 801
ATGGCGTCCACCGGTATTCAAAACAGTGCTATTGTGTATTCCTGCTATTATGAACGCAGCAGGGAAGGCGAACAGTTTGTACCCGAACATGTACTCAGTTACCAGTTATCGGGCATACTGGAACTCAACGATGGTCATAAAACCTATGTGTACCATCCCGGCGACCTGCGCCTGGTGAAACGTAACCGCCTGGTCAAATTCAATAAGCAACCGCCCGAAAACGGCGAGTTCCGATCCCTATCGATCTACCTCAGCCAGGAGGTATTACAGGACTTCAGCAGGGAGTATCATTACCAGGCAATACCGCAGGCCGATGAGGATGCCGTGCTGGAATTACCGCCCAGACCGCTTTTGCGCAGTTATATCGAATCCCTGCTGCCTTACGAAAATGCAACTGATCCCTTCAGTCCCTCGTTGCTTGCGCTTAAACTGAAAGAAGCCATTATGGTATTGCTGCAAACACGCCCGGATCTGAAAGACATACTCTTCGACTTCGATCCGCCCGGCAAGATTGACCTGGCTGCTTTTATGAACCGGAATTTTCATTTCAATGTACAGCTCAGCCGTTTTGCCTACTTAACCGGCCGCAGCCTTGCAGCCTTCAAACGCGATTTCGAAAAGATATTTCATACCTCGCCCGGCAAATGGCTGGTGCAACGCAGGCTGGAAGAAGCCTATTACCAGATCAAAAATAAAGGCAGGGCGCCTTCGGATGTATACCTGGACCTGGGTTTCGAGGATCTCTCGCATTTTTCCTTTGCCTTTAAAAAAGTATACGGCATACCCCCGTCGCGGGTATAA
PROTEIN sequence
Length: 267
MASTGIQNSAIVYSCYYERSREGEQFVPEHVLSYQLSGILELNDGHKTYVYHPGDLRLVKRNRLVKFNKQPPENGEFRSLSIYLSQEVLQDFSREYHYQAIPQADEDAVLELPPRPLLRSYIESLLPYENATDPFSPSLLALKLKEAIMVLLQTRPDLKDILFDFDPPGKIDLAAFMNRNFHFNVQLSRFAYLTGRSLAAFKRDFEKIFHTSPGKWLVQRRLEEAYYQIKNKGRAPSDVYLDLGFEDLSHFSFAFKKVYGIPPSRV*