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berkeley_reactor_200306_planktonic_scaffold_164454_175

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(190415..191878)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 486.0
  • Bit_score: 644
  • Evalue 1.10e-181
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS9_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 486.0
  • Bit_score: 644
  • Evalue 8.20e-182
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 486.0
  • Bit_score: 644
  • Evalue 2.30e-182

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1464
ATGGCAACGATTCAACAACTTATTGCAACGATCAATACCCTGCATATCGCCGGCAACAGCGATACGGAGGTGAGCGCCCTTATCCTCGATTCCCGCAAGGCCCAACCCGGCTGCCTCTTCTTCGCCCAGAAAGGCACCCTGACCGATGGTCATAAATACATTGACCAGGTGATAACCGCCGGCGCTGTAGCCGTGGTTTGCGAAGACCTGCCCGCTACGCTGGCCGAACACGTATGTTATATACAGGTCAAAGAAGTAGCGGCTGTAACCGGTTTGATCGCCGCCACGTATTATGGTAACCCGAGCCGTAATATGACGGTAGTAGGCGTAACCGGCACCAATGGCAAGACCACCGTGGCCACCCTGAGTTATAAACTGTTCCAGGCCCTGGGCTATCATTGCGGCCTGATCTCTACAGTGCAGAACCATATCGGCGAACAGGTAGTACCCGCTACCCATACCACCCCCGACCCGATAAGCCTGCAGGCGCTGTTTCGCCAGATGGCCGACGATGGCTGCAGCCATGTATTTATGGAAGTAAGTTCGCATGCGATCCACCAGCACCGTATCGCCGGCATCGTATTCGACGGGGGCATCTTTACCAATATCACACACGATCATCTTGATTACCACAAGACGTTCGATGAATATATCAGTGTCAAAAAATCGTTTTTCGATCACCTGCCCAAAACGGCGTTTGCGATTACCAATGTAGACGACAAGCGGGGTATGGTGATGTTGCAGAATACCAAAGCCACGCAAAAGACTTATTCTTTACGCGTGCCTTCCGACTTTAAGGGCAAGGTGCTGGAGAACAACCTGGACGGCCTGCATATGACCGTCGATAAACAGGATGTACACTTCAGGCTGAGCGGCCTGTTTAACGCCTATAACCTGTTGGCAGTATATGGTACCGCCGTTTGCCTGGGCGAAGATAAAATGCAGGTACTGGCCGAACTCAGCAATATGCAGGGCGCGCCGGGCCGGTTTGAAACGTACCGTTCGCCTAAGGAACGTGTGCTGGGCATCATCGATTACGCCCATACACCCGATGCGCTGCTCAATGTACTGGCCACCATCAAGCAATTCGGATCGGCCGGCCAGATCATTACCGTAATCGGTTGCGGCGGCGACCGCGACAAGACCAAAAGGCCTTTGATGGCCGAAGTGGCCTGCGAACACAGCAGCAAAGTGATCCTCACCTCCGATAATCCGCGGAGCGAAGATCCGGAAGCGATATTGAACGATATGGAATCGGGACTCAGCTATTCTTATAAAAGAAAGGTACTCCGGATCACCGACCGCAGGGAGGCTATAAAGACCGCCTGCTCGCTGGCGCAGCCCGACGATGTGTTGCTGATTGCCGGCAAAGGACATGAAACGTACCAGGAGGTAAAAGGCGTGCGGCACCATTTCGACGACAAAGAAGTACTGCAGGAGATGTATACCCTTTTAGAAAAATAA
PROTEIN sequence
Length: 488
MATIQQLIATINTLHIAGNSDTEVSALILDSRKAQPGCLFFAQKGTLTDGHKYIDQVITAGAVAVVCEDLPATLAEHVCYIQVKEVAAVTGLIAATYYGNPSRNMTVVGVTGTNGKTTVATLSYKLFQALGYHCGLISTVQNHIGEQVVPATHTTPDPISLQALFRQMADDGCSHVFMEVSSHAIHQHRIAGIVFDGGIFTNITHDHLDYHKTFDEYISVKKSFFDHLPKTAFAITNVDDKRGMVMLQNTKATQKTYSLRVPSDFKGKVLENNLDGLHMTVDKQDVHFRLSGLFNAYNLLAVYGTAVCLGEDKMQVLAELSNMQGAPGRFETYRSPKERVLGIIDYAHTPDALLNVLATIKQFGSAGQIITVIGCGGDRDKTKRPLMAEVACEHSSKVILTSDNPRSEDPEAILNDMESGLSYSYKRKVLRITDRREAIKTACSLAQPDDVLLIAGKGHETYQEVKGVRHHFDDKEVLQEMYTLLEK*