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berkeley_reactor_200306_planktonic_scaffold_176984_312

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 340558..341517

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6W2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 319.0
  • Bit_score: 400
  • Evalue 1.30e-108
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 317.0
  • Bit_score: 407
  • Evalue 2.40e-111
Transcriptional regulator {ECO:0000313|EMBL:AKD54223.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 317.0
  • Bit_score: 407
  • Evalue 1.20e-110

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 960
ATGAAAATAACCGCCAAAGGTCCCGGGATTATGGCCGATTTTACCAGGGCGCTGGGCGCCAAGGTACGCGGGCGTTTCGTGCTGATACCGGCCGACAAGGGCGGTGGTTTTATCACCGGTTTCAACTGGAGCAATGATATACGGGTAATGATCCGGAACTATTACCTTAAAGAACCGGTATTCGTGGAGTGGACCAATGAAGCGATGGAGGCACAGGAGCACGTCGCGTTCCTGCTCGCCGGCGTATTACCCCTGCAACAACGCGAGGACGCACAACTGGCGCAGGAAAACGCCAGTGTGCTGATCTGCACCCAGGTGGTTTCTTCGATCATCAATATGCCGGCGCATACGGCCTTCGGCAGCGTTACGATCGGGGTATCCCGGAAGTACCTGAAGGAACGCTTCGGCCATATCAACCATCCTGTTGTCGCCGGGGTACTGGAAGCCGGTCATGACTTCTTACTCGAAGCTGCGATCACCCCGGAAATGATCCGGAGTGCGGGCGATCTGCTGTTACTACCGGTACCGGAAAGCCTCGAAAGCCAGTACTGTAAATTAAAATGTGAAGAATTGCTCTGCCATGTCTTTAGCCTGTTGCTGCAACGGGAAGATATGCCGGTAAGTAATATGCATATAACCGACATTAAAGCGGTGTATGCGATCAAACTGCACCTGCAGGCCCACCTGGATGAACCACCGGACATCGCTTCGCTGGCCCGGCAGGCAAAAATGAGCGAACCCAAAATGCGGAAGCTTTTTAAACAGACTTTTGGCAAAGGCGTTTTTGCCTATTACCAATCCATGCGGATGCAGGAAGCCGCAAGGCTGCTCCGGGAGCAACGATGGACCGTATCTGAAGTGGGCTACAGGCTTGGCTTTACGAACCTGAGCCACTTTTCCCGTGTATTCGAACAACATACCGGGTTGAAACCCAAGAAATACGCAGCTACACAAAAGTGA
PROTEIN sequence
Length: 320
MKITAKGPGIMADFTRALGAKVRGRFVLIPADKGGGFITGFNWSNDIRVMIRNYYLKEPVFVEWTNEAMEAQEHVAFLLAGVLPLQQREDAQLAQENASVLICTQVVSSIINMPAHTAFGSVTIGVSRKYLKERFGHINHPVVAGVLEAGHDFLLEAAITPEMIRSAGDLLLLPVPESLESQYCKLKCEELLCHVFSLLLQREDMPVSNMHITDIKAVYAIKLHLQAHLDEPPDIASLARQAKMSEPKMRKLFKQTFGKGVFAYYQSMRMQEAARLLREQRWTVSEVGYRLGFTNLSHFSRVFEQHTGLKPKKYAATQK*