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berkeley_reactor_200306_planktonic_scaffold_176984_332

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 368433..369635

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCN9_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 359.0
  • Bit_score: 350
  • Evalue 1.20e-93
Hydrogenase transcriptional regulatory protein hupR1 {ECO:0000313|EMBL:KHJ39313.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 354.0
  • Bit_score: 357
  • Evalue 1.30e-95
response regulator receiver sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 359.0
  • Bit_score: 350
  • Evalue 3.30e-94

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1203
ATGCTGATAGCCCGGGAAGTTGCATCCTATTCCGCGCAGCCGCATTCCCGTGGAATGCATAATTTTCAAAAAAACGCAAGGCAGGTTACATTTACTAACCCTAACGAACGCAACCGGATGAGCACAGGAAACGGAATCAAGATACTGTACATTGACGATGAAATCAATAATCTTATAAGTTTGAAAGCCTTGCTGCGCCTGGATTACCAGGTGCTGACGACAACCAATGTCGATGAGGTGGACCAACTGATGACCCAGCATCCGGACATCCGTATTGTTTTCTGTGACCAGCGTATGCCGCAGAAAACCGGTGTCGAGGTTTTTGCCGAACTCCGCGACAAGCATCCCCTGCCCATCCGGATACTGGTAACCGCCTATACCGATGTGGAAGATATTATTGATGCGATTAACCGGGGACATATATTCCGCTATATCCGCAAACCCTGGTCGCATGCCGACCTGGTAAGCGCCATAGAAGAAGCCAGCAAATTTTATACGGCTACTTCGCTGCTGGCTTCCAGGAACCAGGAGTTGCAGCTGGCTTATAATGAACTCGACAAGTTTGCCTACAATGTAAGTCATCATATACGCAGCCCGATTACCGGTATCCTTATGGCGCTGAATATGGCTATGGAAACCGATGACATTACCGAAATCAAAGACCTGATCGCCATGGTCGATGCCTCGGTAAAAAAGCTGGACGGCCTTATCCTGAATATGTATGATTATTACAATCTTCGCCAGGGTGAGCTTACGATCTCGTTTATCGATCCGGGACAGCTGCTGCAGGAGATCCGGGAACAATACAACGCCTATGCGCAAACCGAGGGGGTTCGTTTTACCGCGAACCTGGCACATACCGAGCCGCTGCGCAGCGATGCCCCAAGCATTAAATTTATCATAACCAACCTGCTTTCCAATGCCTTTAAGTTCCGCGACAAACAACAGGCCGAGCCCTGGGTATCGCTGGATATAGATGTGGAGCAGGCACAGATCAGGATAAGCGACAATGGCCAGGGTATACCTGCCGGCCAGCTGCCCTCTTTGTTTGATATTATCGCAACACCGCGCGACCCTAAAGACAGTAGTGGTTATGGCTTATCGAACATAAAACACCTGCTGGTCAAACTGGGCGGCACCATAGCAGCTGCCTGTGCCGACGGCGTCACTACGTTTACGGTGACGATTCCCAATAAATATTAA
PROTEIN sequence
Length: 401
MLIAREVASYSAQPHSRGMHNFQKNARQVTFTNPNERNRMSTGNGIKILYIDDEINNLISLKALLRLDYQVLTTTNVDEVDQLMTQHPDIRIVFCDQRMPQKTGVEVFAELRDKHPLPIRILVTAYTDVEDIIDAINRGHIFRYIRKPWSHADLVSAIEEASKFYTATSLLASRNQELQLAYNELDKFAYNVSHHIRSPITGILMALNMAMETDDITEIKDLIAMVDASVKKLDGLILNMYDYYNLRQGELTISFIDPGQLLQEIREQYNAYAQTEGVRFTANLAHTEPLRSDAPSIKFIITNLLSNAFKFRDKQQAEPWVSLDIDVEQAQIRISDNGQGIPAGQLPSLFDIIATPRDPKDSSGYGLSNIKHLLVKLGGTIAAACADGVTTFTVTIPNKY*