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berkeley_reactor_200306_planktonic_scaffold_176984_350

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 387248..387955

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBY1_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 213.0
  • Bit_score: 114
  • Evalue 1.40e-22
Chemotaxis protein CheY {ECO:0000313|EMBL:KFC21383.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 245.0
  • Bit_score: 118
  • Evalue 8.10e-24
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 213.0
  • Bit_score: 114
  • Evalue 4.00e-23

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Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGGAACAAGTGCTCTGTGTGATTGTCGACGATGAAATAAGTGCTATCAGTTACCTGGAAAAAATCGTCTTTCAGATTCCACAACTAAAATTAGTGGCAACCTTCAAAAATTCGGTTTCAGCAAAAGCGTATTTATCAGAACACCCTGAAATTTTTCTCGTTTTTTCGGACATCAATATGAGTGGCTTATCAGGCCTGGAGCTGGCCCAGCTTGTTCCCCAAAAGAAAGTCGTGTTTACCACCGGGTATGAAGAATATGCCCGGGACTCCTGGCGGCTCCCAAATGTCATAGGCTATCTTTCAAAACCCATTTCGTTAAAAGATGTCTCAGAAATTGCAGCGAAGACTTACCCCTTATACATTGCAGAGCAGATCGCTTTAACCCATAAAAACACAACACATTTAATTTACAGGTTAGATAATAAAAGCATCGATATCGCCTTCGACAAAATACTTTATATCGAATCGACGGGCAATTACGCCAACATTTTTGCAGAGCATGCGGCCTACTTCGCACCGATACCTTTATGGGAATTGCTAAAGGTGCTGCCATCAAATATCTTTGCCAGGGTAGGAAAATCTACTATCGCCAATAAGAATAAAATAATAGGCACTACCGACAATTATAAACTACTGAAATTAATAGGAGGATCGGAATGCAAATGCAGCAAAATGTATATTCAATACCTGGACCTGCAATCCGTCTAA
PROTEIN sequence
Length: 236
MEQVLCVIVDDEISAISYLEKIVFQIPQLKLVATFKNSVSAKAYLSEHPEIFLVFSDINMSGLSGLELAQLVPQKKVVFTTGYEEYARDSWRLPNVIGYLSKPISLKDVSEIAAKTYPLYIAEQIALTHKNTTHLIYRLDNKSIDIAFDKILYIESTGNYANIFAEHAAYFAPIPLWELLKVLPSNIFARVGKSTIANKNKIIGTTDNYKLLKLIGGSECKCSKMYIQYLDLQSV*