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berkeley_reactor_200306_planktonic_scaffold_176984_41

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 46896..48380

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HB86_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 492.0
  • Bit_score: 710
  • Evalue 7.20e-202
Uncharacterized protein {ECO:0000313|EMBL:ERJ59006.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 492.0
  • Bit_score: 710
  • Evalue 1.00e-201
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 492.0
  • Bit_score: 649
  • Evalue 5.60e-184

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Taxonomy

Sphingobacterium paucimobilis → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1485
ATGAGTAGTCCAATTATAACAAGCCTGTTTAGCAGGATCAGGTTAAAGCCCGGCGCAGAAAGGCCCCTGTACCTGCAGCTATCGGATGCCATCCTGGCTTTGATCAGAACGGGCCAATTGAAAAGCGGTCAGCAGTTGCCCTCCTCCCGGGCGCTTTCCGGGTTATTATCGATCAACAGGATCACCATATCCAAAGCATTCGAAGAGTTACAACTGCAGGGCTGGCTGGAAGGCTTTGTGGGGCGTGGTACATTCGTCGCGGCTCATATACCGGAGGAGCAGGCCAAAAGACCAGGCAACCCGACGGTCGCCAGCGCCCGCAAAGTAGCAGGCTTTGCTATAGACGCTTCCCGTTATGCAGCCAATCCCTATTTTATCCCCAAAGCGGTCTTACACCTGGATGACGGTTACCCCGATCCCAGGCTGGCGCCGTTGCAGGAAATTTACCGCGCCTACCGCAACCAGCTTAGCGGGAGCGGCCTGTACCGGAAGTTTGGCGGTTACAGCTTTCCCGATGGCCCGGAATATTACAAAGACGCGCTATCCGGCTACCTCAACGAAACCAGGAGTTTAAAGACAACGTCCCGTAATATCCTGTCGGTACGGGGTACGCTCATGGGCGTCAACCTGGTATGCAATGCGCTGATCCGCCGCGGCGATATCGTCGTATCGGGCATACCGGGCTGGCAACGCGCCGAACATAACTTTATCCATGCCGGGGCCAAACACCTGGGCATACCGGTCGATGACCATGGCCTGGTGGTAACGGCACTCGAGCAGATCTGCAAAAGGAAGAAGGTAAGAATCGTCTATGTAACACCGCATCACCACTACCCGACCACGGTATCGCTACGCATCGACCGCAGGCTGGAACTGTTGCGCCTGGCCGAACGGTACGGCTTTATCATTTTCGAAGATGACTATGATTTTGATTTTCATTACAGCCGCCGCCCGTTGCCGCCACTTGCAAGCACCGACGAAAACGGGATGGTAATTTATTGCGGCTCTTTCAGCAAAAGCTTCTCGCCCGCTTTCCGCGCAGGTTACCTTGTGGCGCCCGAAAATGTAATCAACCACCTGGCTAATGTACGTATCCTGCTGGACCGGCAAGGTGATCATATCCTGGACCATGCCCTGGCAACACTGTTGAACGATGGTACGCTGCAACGGTATGCCCGGAAAGCCCTGAAGGCATACGAGGAACGACGCGATCATTTCTGCAGTTTATTACAGGCAGAGCTGGGCGCAAAGGTAACCTTCAATATACCCGAAGGCGGCATGACCGTATGGACGCGGTTTGCCCGCCGCTTCGACCCTGGCATGATATCCCGAAAGGCTTATGAAAAAGGACTCTACCTTTCTGATGGTAGCATGCACCGGTACCCGGGCTATGATGAAAATGCGGTACGACTCGGCTTTGCCTCCGCTACCCCGGAAGAACTGGACCGGAGTGTGGCAATCCTGAAAACGGTCCTTAACCGGTAA
PROTEIN sequence
Length: 495
MSSPIITSLFSRIRLKPGAERPLYLQLSDAILALIRTGQLKSGQQLPSSRALSGLLSINRITISKAFEELQLQGWLEGFVGRGTFVAAHIPEEQAKRPGNPTVASARKVAGFAIDASRYAANPYFIPKAVLHLDDGYPDPRLAPLQEIYRAYRNQLSGSGLYRKFGGYSFPDGPEYYKDALSGYLNETRSLKTTSRNILSVRGTLMGVNLVCNALIRRGDIVVSGIPGWQRAEHNFIHAGAKHLGIPVDDHGLVVTALEQICKRKKVRIVYVTPHHHYPTTVSLRIDRRLELLRLAERYGFIIFEDDYDFDFHYSRRPLPPLASTDENGMVIYCGSFSKSFSPAFRAGYLVAPENVINHLANVRILLDRQGDHILDHALATLLNDGTLQRYARKALKAYEERRDHFCSLLQAELGAKVTFNIPEGGMTVWTRFARRFDPGMISRKAYEKGLYLSDGSMHRYPGYDENAVRLGFASATPEELDRSVAILKTVLNR*